Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RN7SKP97-201ENST00000410966 333 ntBASIC7.95□□□□□ -1.14
RXRBP28702 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
RXRBP28702 RAD23BP2-201ENST00000416003 1207 ntBASIC7.95□□□□□ -1.14
RXRBP28702 AL133325.1-201ENST00000421090 382 ntBASIC7.95□□□□□ -1.14
RXRBP28702 OR5M12P-201ENST00000423388 929 ntBASIC7.95□□□□□ -1.14
RXRBP28702 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC7.95□□□□□ -1.14
RXRBP28702 USP9YP24-201ENST00000434374 697 ntBASIC7.95□□□□□ -1.14
RXRBP28702 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC7.95□□□□□ -1.14
RXRBP28702 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC7.95□□□□□ -1.14
RXRBP28702 RPL7P33-201ENST00000444159 742 ntBASIC7.95□□□□□ -1.14
RXRBP28702 USP9YP17-201ENST00000444617 696 ntBASIC7.95□□□□□ -1.14
RXRBP28702 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.95□□□□□ -1.14
RXRBP28702 DEFA11P-201ENST00000446470 261 ntBASIC7.95□□□□□ -1.14
RXRBP28702 AL161722.1-201ENST00000446972 1032 ntBASIC7.95□□□□□ -1.14
RXRBP28702 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC7.95□□□□□ -1.14
RXRBP28702 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RXRBP28702 RPL31P53-201ENST00000457065 348 ntBASIC7.95□□□□□ -1.14
RXRBP28702 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC7.95□□□□□ -1.14
RXRBP28702 RPS18P6-201ENST00000476880 458 ntBASIC7.95□□□□□ -1.14
RXRBP28702 AC083982.1-201ENST00000485679 344 ntBASIC7.95□□□□□ -1.14
RXRBP28702 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC7.95□□□□□ -1.14
RXRBP28702 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC7.95□□□□□ -1.14
RXRBP28702 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.95□□□□□ -1.14
RXRBP28702 RAB9BP1-201ENST00000519581 626 ntBASIC7.95□□□□□ -1.14
RXRBP28702 OSBPL9P3-201ENST00000534523 595 ntBASIC7.95□□□□□ -1.14
RXRBP28702 RFPL1S-203ENST00000539579 330 ntBASIC7.95□□□□□ -1.14
RXRBP28702 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RXRBP28702 AC084824.1-201ENST00000550917 1005 ntBASIC7.95□□□□□ -1.14
RXRBP28702 AC024909.2-201ENST00000553035 286 ntBASIC7.95□□□□□ -1.14
RXRBP28702 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC7.95□□□□□ -1.14
RXRBP28702 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC7.95□□□□□ -1.14
RXRBP28702 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC7.95□□□□□ -1.14
RXRBP28702 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.95□□□□□ -1.14
RXRBP28702 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC7.95□□□□□ -1.14
RXRBP28702 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC7.95□□□□□ -1.14
RXRBP28702 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.95□□□□□ -1.14
RXRBP28702 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.95□□□□□ -1.14
RXRBP28702 AC130456.6-201ENST00000623745 765 ntBASIC7.95□□□□□ -1.14
RXRBP28702 MIR7641-1-201ENST00000627518 61 ntBASIC7.95□□□□□ -1.14
RXRBP28702 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC7.95□□□□□ -1.14
RXRBP28702 AC183089.2-201ENST00000637931 916 ntBASIC7.95□□□□□ -1.14
RXRBP28702 OR7A1P-202ENST00000641542 1158 ntBASIC7.95□□□□□ -1.14
RXRBP28702 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RXRBP28702 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.95□□□□□ -1.14
RXRBP28702 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RXRBP28702 AC011455.2-201ENST00000599320 3336 ntBASIC7.95□□□□□ -1.14
RXRBP28702 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
RXRBP28702 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
RXRBP28702 CD86-204ENST00000469710 1604 ntTSL 2 BASIC7.95□□□□□ -1.14
RXRBP28702 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
RXRBP28702 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
RXRBP28702 AC005261.4-201ENST00000600047 1385 ntBASIC7.95□□□□□ -1.14
RXRBP28702 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RXRBP28702 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RXRBP28702 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RXRBP28702 AC114786.1-201ENST00000512892 1415 ntBASIC7.95□□□□□ -1.14
RXRBP28702 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RXRBP28702 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
RXRBP28702 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
RXRBP28702 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RXRBP28702 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
RXRBP28702 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.94□□□□□ -1.14
RXRBP28702 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
RXRBP28702 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.94□□□□□ -1.14
RXRBP28702 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RXRBP28702 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RXRBP28702 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
RXRBP28702 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.94□□□□□ -1.14
RXRBP28702 AP004289.1-201ENST00000436307 2205 ntBASIC7.94□□□□□ -1.14
RXRBP28702 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RXRBP28702 UGT2B25P-201ENST00000511504 1586 ntBASIC7.94□□□□□ -1.14
RXRBP28702 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RXRBP28702 AL008638.3-201ENST00000623027 5182 ntBASIC7.94□□□□□ -1.14
RXRBP28702 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.94□□□□□ -1.14
RXRBP28702 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RXRBP28702 RNA5SP234-201ENST00000363916 119 ntBASIC7.94□□□□□ -1.14
RXRBP28702 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC7.94□□□□□ -1.14
RXRBP28702 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.94□□□□□ -1.14
RXRBP28702 UBE2V1P11-201ENST00000411559 285 ntBASIC7.94□□□□□ -1.14
RXRBP28702 MFSD13B-201ENST00000420133 1290 ntBASIC7.94□□□□□ -1.14
RXRBP28702 AC241520.1-201ENST00000422654 1099 ntBASIC7.94□□□□□ -1.14
RXRBP28702 DNAJA1P1-201ENST00000425106 1187 ntBASIC7.94□□□□□ -1.14
RXRBP28702 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC7.94□□□□□ -1.14
RXRBP28702 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.94□□□□□ -1.14
RXRBP28702 DLGAP5P1-201ENST00000430307 464 ntBASIC7.94□□□□□ -1.14
RXRBP28702 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC7.94□□□□□ -1.14
RXRBP28702 UBE2D3P1-201ENST00000436669 444 ntBASIC7.94□□□□□ -1.14
RXRBP28702 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.94□□□□□ -1.14
RXRBP28702 RN7SL205P-201ENST00000490174 284 ntBASIC7.94□□□□□ -1.14
RXRBP28702 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC7.94□□□□□ -1.14
RXRBP28702 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC7.94□□□□□ -1.14
RXRBP28702 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.94□□□□□ -1.14
RXRBP28702 RNU6ATAC24P-201ENST00000516811 135 ntBASIC7.94□□□□□ -1.14
RXRBP28702 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC7.94□□□□□ -1.14
RXRBP28702 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RXRBP28702 OR9L1P-201ENST00000529493 933 ntBASIC7.94□□□□□ -1.14
RXRBP28702 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RXRBP28702 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
RXRBP28702 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
RXRBP28702 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms