Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 UBE2V1P5-201ENST00000440070 405 ntBASIC5.79□□□□□ -1.48
CD40P25942 AC093155.1-201ENST00000440164 826 ntBASIC5.79□□□□□ -1.48
CD40P25942 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 IGKV1OR10-1-201ENST00000442306 329 ntBASIC5.79□□□□□ -1.48
CD40P25942 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.79□□□□□ -1.48
CD40P25942 AC104306.1-201ENST00000449702 371 ntBASIC5.79□□□□□ -1.48
CD40P25942 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.79□□□□□ -1.48
CD40P25942 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.79□□□□□ -1.48
CD40P25942 RFC5P1-201ENST00000454419 874 ntBASIC5.79□□□□□ -1.48
CD40P25942 IGKV1OR22-5-201ENST00000458718 354 ntBASIC5.79□□□□□ -1.48
CD40P25942 AC021074.2-201ENST00000468434 172 ntBASIC5.79□□□□□ -1.48
CD40P25942 PGBD4P1-201ENST00000473644 407 ntBASIC5.79□□□□□ -1.48
CD40P25942 VPS26AP1-201ENST00000483197 979 ntBASIC5.79□□□□□ -1.48
CD40P25942 AC091544.1-201ENST00000484702 348 ntBASIC5.79□□□□□ -1.48
CD40P25942 AC092045.1-201ENST00000495716 1231 ntBASIC5.79□□□□□ -1.48
CD40P25942 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.79□□□□□ -1.48
CD40P25942 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.79□□□□□ -1.48
CD40P25942 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.79□□□□□ -1.48
CD40P25942 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.79□□□□□ -1.48
CD40P25942 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.79□□□□□ -1.48
CD40P25942 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.79□□□□□ -1.48
CD40P25942 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.79□□□□□ -1.48
CD40P25942 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 AC020937.1-201ENST00000519677 1013 ntBASIC5.79□□□□□ -1.48
CD40P25942 AC087808.1-201ENST00000520501 361 ntBASIC5.79□□□□□ -1.48
CD40P25942 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.79□□□□□ -1.48
CD40P25942 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.79□□□□□ -1.48
CD40P25942 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.79□□□□□ -1.48
CD40P25942 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.79□□□□□ -1.48
CD40P25942 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC5.79□□□□□ -1.48
CD40P25942 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.79□□□□□ -1.48
CD40P25942 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.79□□□□□ -1.48
CD40P25942 ACTR3BP3-201ENST00000565577 979 ntBASIC5.79□□□□□ -1.48
CD40P25942 BPTFP1-201ENST00000579209 492 ntBASIC5.79□□□□□ -1.48
CD40P25942 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.79□□□□□ -1.48
CD40P25942 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.79□□□□□ -1.48
CD40P25942 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.79□□□□□ -1.48
CD40P25942 AL031985.2-201ENST00000600955 480 ntBASIC5.79□□□□□ -1.48
CD40P25942 AC009220.3-201ENST00000604318 586 ntBASIC5.79□□□□□ -1.48
CD40P25942 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.79□□□□□ -1.48
CD40P25942 AP002345.2-201ENST00000609961 904 ntBASIC5.79□□□□□ -1.48
CD40P25942 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.79□□□□□ -1.48
CD40P25942 AC097505.1-201ENST00000610199 565 ntBASIC5.79□□□□□ -1.48
CD40P25942 AC068726.1-201ENST00000610993 341 ntBASIC5.79□□□□□ -1.48
CD40P25942 AC010333.3-201ENST00000615100 402 ntBASIC5.79□□□□□ -1.48
CD40P25942 AC069209.1-201ENST00000619282 651 ntBASIC5.79□□□□□ -1.48
CD40P25942 U1.31-201ENST00000620022 160 ntBASIC5.79□□□□□ -1.48
CD40P25942 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CD40P25942 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.79□□□□□ -1.48
CD40P25942 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC5.79□□□□□ -1.48
CD40P25942 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC5.79□□□□□ -1.48
CD40P25942 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.79□□□□□ -1.48
CD40P25942 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 AC096992.2-201ENST00000609553 1684 ntBASIC5.79□□□□□ -1.48
CD40P25942 CR381670.1-201ENST00000624291 1693 ntBASIC5.79□□□□□ -1.48
CD40P25942 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CD40P25942 MAPK10-357ENST00000641831 2858 ntBASIC5.78□□□□□ -1.48
CD40P25942 Z99496.1-201ENST00000469424 1477 ntBASIC5.78□□□□□ -1.48
CD40P25942 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
CD40P25942 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CD40P25942 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.78□□□□□ -1.48
CD40P25942 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
CD40P25942 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CD40P25942 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC5.78□□□□□ -1.48
CD40P25942 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC5.78□□□□□ -1.48
CD40P25942 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CD40P25942 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CD40P25942 PPIAP24-201ENST00000328558 471 ntBASIC5.78□□□□□ -1.48
CD40P25942 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CD40P25942 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CD40P25942 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CD40P25942 RN7SKP296-201ENST00000411185 341 ntBASIC5.78□□□□□ -1.48
CD40P25942 RANP6-201ENST00000413691 644 ntBASIC5.78□□□□□ -1.48
CD40P25942 AL161449.1-201ENST00000414531 1199 ntBASIC5.78□□□□□ -1.48
CD40P25942 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.78□□□□□ -1.48
CD40P25942 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.78□□□□□ -1.48
CD40P25942 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.78□□□□□ -1.48
CD40P25942 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.78□□□□□ -1.48
CD40P25942 AL645939.3-201ENST00000435408 225 ntBASIC5.78□□□□□ -1.48
CD40P25942 COL11A2P1-205ENST00000441798 676 ntBASIC5.78□□□□□ -1.48
CD40P25942 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.78□□□□□ -1.48
CD40P25942 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms