Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.62□□□□□ -1.19
LMNB1P20700 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
LMNB1P20700 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.62□□□□□ -1.19
LMNB1P20700 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LMNB1P20700 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LMNB1P20700 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.62□□□□□ -1.19
LMNB1P20700 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LMNB1P20700 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LMNB1P20700 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LMNB1P20700 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
LMNB1P20700 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
LMNB1P20700 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
LMNB1P20700 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
LMNB1P20700 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
LMNB1P20700 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC7.62□□□□□ -1.19
LMNB1P20700 Y_RNA.472-201ENST00000384322 102 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
LMNB1P20700 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
LMNB1P20700 AL138880.1-201ENST00000405824 642 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 AL354890.1-201ENST00000413730 346 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.62□□□□□ -1.19
LMNB1P20700 MFSD13B-201ENST00000420133 1290 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 DUTP4-201ENST00000424782 475 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 AC245884.2-201ENST00000426257 404 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 PPIAP10-201ENST00000438675 458 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC7.62□□□□□ -1.19
LMNB1P20700 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC7.62□□□□□ -1.19
LMNB1P20700 FTLP8-201ENST00000446770 267 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC7.62□□□□□ -1.19
LMNB1P20700 AC092685.1-201ENST00000447960 1243 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 CCRL1P1-201ENST00000449542 1053 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.62□□□□□ -1.19
LMNB1P20700 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.62□□□□□ -1.19
LMNB1P20700 AC073387.1-201ENST00000453261 709 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC7.62□□□□□ -1.19
LMNB1P20700 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC7.62□□□□□ -1.19
LMNB1P20700 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.62□□□□□ -1.19
LMNB1P20700 AC093270.2-201ENST00000486157 792 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 SUMO1P1-201ENST00000497904 306 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 AC074087.1-201ENST00000512059 724 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.62□□□□□ -1.19
LMNB1P20700 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.62□□□□□ -1.19
LMNB1P20700 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LMNB1P20700 OR8I1P-201ENST00000529291 931 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 OR9L1P-201ENST00000529493 933 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 AC027026.1-201ENST00000532323 742 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC7.62□□□□□ -1.19
LMNB1P20700 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC7.62□□□□□ -1.19
LMNB1P20700 FXNP1-201ENST00000555153 337 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 NDUFAF4P1-201ENST00000559425 519 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC7.62□□□□□ -1.19
LMNB1P20700 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC7.62□□□□□ -1.19
LMNB1P20700 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LMNB1P20700 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LMNB1P20700 MTND3P19-201ENST00000603825 345 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 MIR6748-201ENST00000610433 71 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 AC037198.3-201ENST00000616754 526 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 AL121895.2-201ENST00000619558 447 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 MRPL57P1-201ENST00000621486 265 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LMNB1P20700 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LMNB1P20700 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
LMNB1P20700 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
LMNB1P20700 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
LMNB1P20700 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.62□□□□□ -1.19
LMNB1P20700 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
LMNB1P20700 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.62□□□□□ -1.19
LMNB1P20700 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LMNB1P20700 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.62□□□□□ -1.19
LMNB1P20700 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LMNB1P20700 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.61□□□□□ -1.19
LMNB1P20700 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LMNB1P20700 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LMNB1P20700 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.61□□□□□ -1.19
LMNB1P20700 AC027279.4-201ENST00000624371 2072 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 AC005261.4-201ENST00000600047 1385 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.61□□□□□ -1.19
LMNB1P20700 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.61□□□□□ -1.19
LMNB1P20700 AC109780.1-201ENST00000451768 1344 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 AC117409.1-201ENST00000470499 1310 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
LMNB1P20700 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LMNB1P20700 AP005139.1-201ENST00000580702 1647 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
LMNB1P20700 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
LMNB1P20700 SNORD56.4-201ENST00000363883 71 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 SNORD116-12-201ENST00000384468 92 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 OR7E101P-201ENST00000400428 513 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 AL391422.1-201ENST00000402155 436 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 NPM1P4-201ENST00000414095 812 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC7.61□□□□□ -1.19
LMNB1P20700 RPL35AP31-201ENST00000418340 337 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 SEPT2P1-201ENST00000419651 180 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 USP9YP26-201ENST00000421008 661 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LMNB1P20700 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC7.61□□□□□ -1.19
LMNB1P20700 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC7.61□□□□□ -1.19
LMNB1P20700 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.61□□□□□ -1.19
LMNB1P20700 Z95152.1-201ENST00000453556 656 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms