Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.38□□□□□ -1.39
TOP1P11387 AC004808.2-201ENST00000627965 773 ntBASIC6.38□□□□□ -1.39
TOP1P11387 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.38□□□□□ -1.39
TOP1P11387 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
TOP1P11387 AC235565.1-201ENST00000456962 1325 ntBASIC6.38□□□□□ -1.39
TOP1P11387 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TOP1P11387 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
TOP1P11387 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
TOP1P11387 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
TOP1P11387 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TOP1P11387 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.37□□□□□ -1.39
TOP1P11387 GVINP1-202ENST00000531871 7271 ntBASIC6.37□□□□□ -1.39
TOP1P11387 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.37□□□□□ -1.39
TOP1P11387 SNORA70.6-201ENST00000383934 134 ntBASIC6.37□□□□□ -1.39
TOP1P11387 RNA5SP339-201ENST00000390987 122 ntBASIC6.37□□□□□ -1.39
TOP1P11387 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TOP1P11387 MIR1178-201ENST00000408396 91 ntBASIC6.37□□□□□ -1.39
TOP1P11387 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.37□□□□□ -1.39
TOP1P11387 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.37□□□□□ -1.39
TOP1P11387 VTI1BP4-201ENST00000427516 527 ntBASIC6.37□□□□□ -1.39
TOP1P11387 DSTNP5-201ENST00000427921 523 ntBASIC6.37□□□□□ -1.39
TOP1P11387 RPL12P17-201ENST00000432393 498 ntBASIC6.37□□□□□ -1.39
TOP1P11387 GSTM5P1-201ENST00000434751 660 ntBASIC6.37□□□□□ -1.39
TOP1P11387 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.37□□□□□ -1.39
TOP1P11387 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.37□□□□□ -1.39
TOP1P11387 PGAM1P13-201ENST00000507497 754 ntBASIC6.37□□□□□ -1.39
TOP1P11387 NPM1P21-201ENST00000513394 762 ntBASIC6.37□□□□□ -1.39
TOP1P11387 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.37□□□□□ -1.39
TOP1P11387 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.37□□□□□ -1.39
TOP1P11387 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.37□□□□□ -1.39
TOP1P11387 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.37□□□□□ -1.39
TOP1P11387 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.37□□□□□ -1.39
TOP1P11387 AL049779.2-201ENST00000553847 315 ntBASIC6.37□□□□□ -1.39
TOP1P11387 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TOP1P11387 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.37□□□□□ -1.39
TOP1P11387 MIR1269B-201ENST00000580405 75 ntBASIC6.37□□□□□ -1.39
TOP1P11387 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TOP1P11387 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.37□□□□□ -1.39
TOP1P11387 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.37□□□□□ -1.39
TOP1P11387 AC009237.13-201ENST00000603193 276 ntBASIC6.37□□□□□ -1.39
TOP1P11387 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TOP1P11387 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TOP1P11387 AC104964.3-201ENST00000606115 2860 ntBASIC6.37□□□□□ -1.39
TOP1P11387 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TOP1P11387 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TOP1P11387 AC083899.1-201ENST00000454465 3819 ntBASIC6.37□□□□□ -1.39
TOP1P11387 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TOP1P11387 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TOP1P11387 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.36□□□□□ -1.39
TOP1P11387 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TOP1P11387 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.36□□□□□ -1.39
TOP1P11387 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TOP1P11387 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
TOP1P11387 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TOP1P11387 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.36□□□□□ -1.39
TOP1P11387 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.36□□□□□ -1.39
TOP1P11387 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TOP1P11387 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TOP1P11387 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.36□□□□□ -1.39
TOP1P11387 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.36□□□□□ -1.39
TOP1P11387 AP000534.2-201ENST00000412729 568 ntBASIC6.36□□□□□ -1.39
TOP1P11387 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.36□□□□□ -1.39
TOP1P11387 AL163193.1-201ENST00000444895 788 ntBASIC6.36□□□□□ -1.39
TOP1P11387 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.36□□□□□ -1.39
TOP1P11387 RPS4XP1-201ENST00000482189 787 ntBASIC6.36□□□□□ -1.39
TOP1P11387 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.36□□□□□ -1.39
TOP1P11387 HMGB1P40-201ENST00000525121 540 ntBASIC6.36□□□□□ -1.39
TOP1P11387 OR4A43P-201ENST00000532938 908 ntBASIC6.36□□□□□ -1.39
TOP1P11387 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.36□□□□□ -1.39
TOP1P11387 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.36□□□□□ -1.39
TOP1P11387 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.36□□□□□ -1.39
TOP1P11387 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.36□□□□□ -1.39
TOP1P11387 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
TOP1P11387 RBM22P1-201ENST00000578589 1214 ntBASIC6.36□□□□□ -1.39
TOP1P11387 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.36□□□□□ -1.39
TOP1P11387 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.36□□□□□ -1.39
TOP1P11387 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.36□□□□□ -1.39
TOP1P11387 AL139041.1-201ENST00000605480 610 ntBASIC6.36□□□□□ -1.39
TOP1P11387 AL512329.2-201ENST00000607350 548 ntBASIC6.36□□□□□ -1.39
TOP1P11387 AC008115.4-201ENST00000619780 775 ntBASIC6.36□□□□□ -1.39
TOP1P11387 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.36□□□□□ -1.39
TOP1P11387 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TOP1P11387 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
TOP1P11387 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
TOP1P11387 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
TOP1P11387 AP001029.2-203ENST00000589795 4910 ntBASIC6.36□□□□□ -1.39
TOP1P11387 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TOP1P11387 AC006206.1-201ENST00000544842 3387 ntBASIC6.35□□□□□ -1.39
TOP1P11387 AC007938.2-201ENST00000604666 2634 ntBASIC6.35□□□□□ -1.39
TOP1P11387 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.35□□□□□ -1.39
TOP1P11387 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.35□□□□□ -1.39
TOP1P11387 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.35□□□□□ -1.39
TOP1P11387 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TOP1P11387 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TOP1P11387 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TOP1P11387 PABPC1P6-201ENST00000445594 1829 ntBASIC6.35□□□□□ -1.39
TOP1P11387 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
TOP1P11387 OR9K1P-201ENST00000326513 941 ntBASIC6.35□□□□□ -1.39
TOP1P11387 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TOP1P11387 RNU6-171P-201ENST00000384354 107 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms