Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC009027.1-201ENST00000604510 479 ntBASIC6.91□□□□□ -1.3
COL5A2P05997 AC135068.12-201ENST00000637370 931 ntBASIC6.91□□□□□ -1.3
COL5A2P05997 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL5A2P05997 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL5A2P05997 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL5A2P05997 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL5A2P05997 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL5A2P05997 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL5A2P05997 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.9□□□□□ -1.3
COL5A2P05997 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
COL5A2P05997 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL5A2P05997 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
COL5A2P05997 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.9□□□□□ -1.31
COL5A2P05997 RNA5SP332-201ENST00000391063 115 ntBASIC6.9□□□□□ -1.31
COL5A2P05997 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.9□□□□□ -1.31
COL5A2P05997 AC069213.2-201ENST00000420238 366 ntBASIC6.9□□□□□ -1.31
COL5A2P05997 AC004074.1-201ENST00000421810 1063 ntBASIC6.9□□□□□ -1.31
COL5A2P05997 RPL18P10-201ENST00000425606 538 ntBASIC6.9□□□□□ -1.31
COL5A2P05997 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.9□□□□□ -1.31
COL5A2P05997 AC007559.1-201ENST00000428736 355 ntBASIC6.9□□□□□ -1.31
COL5A2P05997 DNAJC19P7-201ENST00000428811 344 ntBASIC6.9□□□□□ -1.31
COL5A2P05997 SERPINA7P1-201ENST00000443077 631 ntBASIC6.9□□□□□ -1.31
COL5A2P05997 AC009963.2-201ENST00000453431 138 ntBASIC6.9□□□□□ -1.31
COL5A2P05997 GAPDHP62-201ENST00000515313 990 ntBASIC6.9□□□□□ -1.31
COL5A2P05997 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.9□□□□□ -1.31
COL5A2P05997 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.9□□□□□ -1.31
COL5A2P05997 OR4A43P-201ENST00000532938 908 ntBASIC6.9□□□□□ -1.31
COL5A2P05997 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.9□□□□□ -1.31
COL5A2P05997 AC009704.2-201ENST00000618739 483 ntBASIC6.9□□□□□ -1.31
COL5A2P05997 AP003400.3-201ENST00000624904 346 ntBASIC6.9□□□□□ -1.31
COL5A2P05997 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.9□□□□□ -1.31
COL5A2P05997 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL5A2P05997 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL5A2P05997 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.9□□□□□ -1.31
COL5A2P05997 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.9□□□□□ -1.31
COL5A2P05997 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
COL5A2P05997 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL5A2P05997 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.89□□□□□ -1.31
COL5A2P05997 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL5A2P05997 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
COL5A2P05997 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL5A2P05997 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.89□□□□□ -1.31
COL5A2P05997 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL5A2P05997 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.89□□□□□ -1.31
COL5A2P05997 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
COL5A2P05997 RNU1-59P-201ENST00000364829 162 ntBASIC6.89□□□□□ -1.31
COL5A2P05997 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
COL5A2P05997 RPS16P5-201ENST00000406501 404 ntBASIC6.89□□□□□ -1.31
COL5A2P05997 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.89□□□□□ -1.31
COL5A2P05997 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
COL5A2P05997 LINC02210-201ENST00000444561 288 ntBASIC6.89□□□□□ -1.31
COL5A2P05997 MRPS33P2-201ENST00000507850 322 ntBASIC6.89□□□□□ -1.31
COL5A2P05997 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
COL5A2P05997 AC105254.2-201ENST00000603636 436 ntBASIC6.89□□□□□ -1.31
COL5A2P05997 U1.25-201ENST00000614085 162 ntBASIC6.89□□□□□ -1.31
COL5A2P05997 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.89□□□□□ -1.31
COL5A2P05997 U1.34-201ENST00000618578 162 ntBASIC6.89□□□□□ -1.31
COL5A2P05997 U1.31-201ENST00000620022 160 ntBASIC6.89□□□□□ -1.31
COL5A2P05997 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.89□□□□□ -1.31
COL5A2P05997 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL5A2P05997 AL359715.3-201ENST00000569267 2123 ntBASIC6.89□□□□□ -1.31
COL5A2P05997 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL5A2P05997 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.89□□□□□ -1.31
COL5A2P05997 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL5A2P05997 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL5A2P05997 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL5A2P05997 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL5A2P05997 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL5A2P05997 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL5A2P05997 AC100757.1-201ENST00000616872 1835 ntBASIC6.88□□□□□ -1.31
COL5A2P05997 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
COL5A2P05997 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL5A2P05997 OR52J1P-201ENST00000450596 932 ntBASIC6.88□□□□□ -1.31
COL5A2P05997 AC068587.1-201ENST00000483613 781 ntBASIC6.88□□□□□ -1.31
COL5A2P05997 AC026979.1-201ENST00000492525 396 ntBASIC6.88□□□□□ -1.31
COL5A2P05997 GAPDHP56-201ENST00000506031 988 ntBASIC6.88□□□□□ -1.31
COL5A2P05997 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.88□□□□□ -1.31
COL5A2P05997 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.88□□□□□ -1.31
COL5A2P05997 AC009962.1-201ENST00000567327 3813 ntBASIC6.88□□□□□ -1.31
COL5A2P05997 RN7SL690P-201ENST00000582087 240 ntBASIC6.88□□□□□ -1.31
COL5A2P05997 AC060780.2-201ENST00000589047 198 ntBASIC6.88□□□□□ -1.31
COL5A2P05997 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL5A2P05997 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
COL5A2P05997 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL5A2P05997 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL5A2P05997 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
COL5A2P05997 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL5A2P05997 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.88□□□□□ -1.31
COL5A2P05997 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL5A2P05997 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL5A2P05997 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL5A2P05997 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC6.87□□□□□ -1.31
COL5A2P05997 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.87□□□□□ -1.31
COL5A2P05997 AL021877.2-201ENST00000624442 10684 ntBASIC6.87□□□□□ -1.31
COL5A2P05997 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
COL5A2P05997 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.87□□□□□ -1.31
COL5A2P05997 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL5A2P05997 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC6.87□□□□□ -1.31
COL5A2P05997 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL5A2P05997 RPL32P3-201ENST00000359025 275 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms