Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HLA-DPB1P04440 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
HLA-DPB1P04440 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.84□□□□□ -1.64
HLA-DPB1P04440 LINC02019-201ENST00000608605 2060 ntBASIC4.84□□□□□ -1.64
HLA-DPB1P04440 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
HLA-DPB1P04440 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 AC015689.2-201ENST00000528172 1738 ntBASIC4.83□□□□□ -1.64
HLA-DPB1P04440 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 TCP1P3-201ENST00000414406 1498 ntBASIC4.83□□□□□ -1.64
HLA-DPB1P04440 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 AC007738.1-201ENST00000413892 348 ntBASIC4.83□□□□□ -1.64
HLA-DPB1P04440 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 AL662874.1-201ENST00000426065 230 ntBASIC4.83□□□□□ -1.64
HLA-DPB1P04440 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 AC007998.1-201ENST00000474156 672 ntBASIC4.83□□□□□ -1.64
HLA-DPB1P04440 AC087672.1-201ENST00000479876 766 ntBASIC4.83□□□□□ -1.64
HLA-DPB1P04440 AC022133.1-201ENST00000490961 571 ntBASIC4.83□□□□□ -1.64
HLA-DPB1P04440 SNORA43.3-201ENST00000517240 103 ntBASIC4.83□□□□□ -1.64
HLA-DPB1P04440 FTH1P11-201ENST00000517577 551 ntBASIC4.83□□□□□ -1.64
HLA-DPB1P04440 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 AC021733.2-201ENST00000518830 497 ntBASIC4.83□□□□□ -1.64
HLA-DPB1P04440 AP006245.2-201ENST00000522004 300 ntBASIC4.83□□□□□ -1.64
HLA-DPB1P04440 MRPS16P1-201ENST00000523462 412 ntBASIC4.83□□□□□ -1.64
HLA-DPB1P04440 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 MIR3936-201ENST00000584304 110 ntBASIC4.83□□□□□ -1.64
HLA-DPB1P04440 AC008521.2-201ENST00000591021 259 ntBASIC4.83□□□□□ -1.64
HLA-DPB1P04440 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 AC010809.3-201ENST00000621310 641 ntBASIC4.83□□□□□ -1.64
HLA-DPB1P04440 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPB1P04440 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 SMG1P7-201ENST00000565246 2704 ntBASIC4.82□□□□□ -1.64
HLA-DPB1P04440 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 AC139426.3-201ENST00000605648 2059 ntBASIC4.82□□□□□ -1.64
HLA-DPB1P04440 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 AL450345.1-202ENST00000605741 3881 ntBASIC4.82□□□□□ -1.64
HLA-DPB1P04440 OR56A4-201ENST00000330728 1209 ntBASIC4.82□□□□□ -1.64
HLA-DPB1P04440 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 RNU6-316P-201ENST00000391027 107 ntBASIC4.82□□□□□ -1.64
HLA-DPB1P04440 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 AC104333.2-201ENST00000422630 192 ntBASIC4.82□□□□□ -1.64
HLA-DPB1P04440 GAPDHP34-201ENST00000432112 823 ntBASIC4.82□□□□□ -1.64
HLA-DPB1P04440 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 AC117394.1-201ENST00000477323 567 ntBASIC4.82□□□□□ -1.64
HLA-DPB1P04440 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 RNU6-615P-201ENST00000516065 106 ntBASIC4.82□□□□□ -1.64
HLA-DPB1P04440 CYCSP22-201ENST00000517555 339 ntBASIC4.82□□□□□ -1.64
HLA-DPB1P04440 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 AC112191.2-201ENST00000522428 333 ntBASIC4.82□□□□□ -1.64
HLA-DPB1P04440 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.82□□□□□ -1.64
HLA-DPB1P04440 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 AC000374.1-201ENST00000434698 1745 ntBASIC4.82□□□□□ -1.64
HLA-DPB1P04440 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.82□□□□□ -1.64
HLA-DPB1P04440 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms