Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 VIM2P-201ENST00000402383 1294 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 COX6A1P3-201ENST00000404167 293 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 FCF1P10-201ENST00000407590 479 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 SNORA11.5-201ENST00000408163 128 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 RNU6-248P-201ENST00000410720 107 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 AL355862.1-201ENST00000412705 353 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 AC109780.2-201ENST00000413467 845 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 AC138393.2-201ENST00000414742 246 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 MTATP6P27-201ENST00000416987 621 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC6.93□□□□□ -1.3
PDGFAP04085 FAM183DP-201ENST00000421987 399 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PDGFAP04085 RPS27AP14-201ENST00000422868 454 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 AL589794.1-201ENST00000424971 390 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 AC007742.1-201ENST00000425789 329 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC6.93□□□□□ -1.3
PDGFAP04085 ELOCP26-201ENST00000436067 329 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 OSTCP2-201ENST00000437956 444 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 AL450263.2-201ENST00000439400 589 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 DBIL5P2-201ENST00000443827 253 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 NPM1P39-201ENST00000449818 867 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 PPIAP32-201ENST00000449940 472 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 snoU109.1-201ENST00000459339 135 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 TDGF1P6-201ENST00000463873 448 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
PDGFAP04085 RN7SL149P-201ENST00000465197 281 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 RN7SL233P-201ENST00000469988 277 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC6.93□□□□□ -1.3
PDGFAP04085 HMGB1P28-201ENST00000507778 552 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 ARL2BPP6-201ENST00000512757 439 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 RNA5SP216-201ENST00000516111 123 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 RNU6-1261P-201ENST00000517194 104 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC6.93□□□□□ -1.3
PDGFAP04085 OR8A2P-201ENST00000528631 952 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.93□□□□□ -1.3
PDGFAP04085 CFL2-206ENST00000556161 546 ntTSL 4 BASIC6.93□□□□□ -1.3
PDGFAP04085 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PDGFAP04085 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.93□□□□□ -1.3
PDGFAP04085 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.93□□□□□ -1.3
PDGFAP04085 AP000907.4-201ENST00000604143 237 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 TAS2R6P-201ENST00000605022 826 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.93□□□□□ -1.3
PDGFAP04085 AC113361.1-201ENST00000606683 543 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 AL022238.3-201ENST00000609279 443 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 AC131902.3-201ENST00000611767 581 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 MIAT_exon1.1-201ENST00000617016 135 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC6.93□□□□□ -1.3
PDGFAP04085 AC124864.2-201ENST00000624736 186 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.93□□□□□ -1.3
PDGFAP04085 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
PDGFAP04085 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PDGFAP04085 DCAF13P1-201ENST00000495256 1330 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.93□□□□□ -1.3
PDGFAP04085 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PDGFAP04085 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PDGFAP04085 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
PDGFAP04085 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PDGFAP04085 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PDGFAP04085 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC6.93□□□□□ -1.3
PDGFAP04085 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PDGFAP04085 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.92□□□□□ -1.3
PDGFAP04085 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC6.92□□□□□ -1.3
PDGFAP04085 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6.92□□□□□ -1.3
PDGFAP04085 AC005261.2-201ENST00000593427 4258 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC6.92□□□□□ -1.3
PDGFAP04085 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
PDGFAP04085 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.92□□□□□ -1.3
PDGFAP04085 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 RNU6-582P-201ENST00000362989 107 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 RNU4-81P-201ENST00000363561 144 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
PDGFAP04085 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 SNORA2C-201ENST00000408564 137 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.92□□□□□ -1.3
PDGFAP04085 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.92□□□□□ -1.3
PDGFAP04085 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.92□□□□□ -1.3
PDGFAP04085 HMGB1P11-201ENST00000413899 637 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC6.92□□□□□ -1.3
PDGFAP04085 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.92□□□□□ -1.3
PDGFAP04085 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.92□□□□□ -1.3
PDGFAP04085 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC6.92□□□□□ -1.3
PDGFAP04085 AL139413.1-201ENST00000421309 217 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC6.92□□□□□ -1.3
PDGFAP04085 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.92□□□□□ -1.3
PDGFAP04085 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC6.92□□□□□ -1.3
PDGFAP04085 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.92□□□□□ -1.3
PDGFAP04085 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.92□□□□□ -1.3
PDGFAP04085 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC6.92□□□□□ -1.3
PDGFAP04085 AL022238.1-201ENST00000442557 355 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms