Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
UPK1BO75841 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
UPK1BO75841 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.55□□□□□ -1.68
UPK1BO75841 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.55□□□□□ -1.68
UPK1BO75841 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.55□□□□□ -1.68
UPK1BO75841 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
UPK1BO75841 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UPK1BO75841 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
UPK1BO75841 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UPK1BO75841 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.55□□□□□ -1.68
UPK1BO75841 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.55□□□□□ -1.68
UPK1BO75841 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.54□□□□□ -1.68
UPK1BO75841 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.54□□□□□ -1.68
UPK1BO75841 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
UPK1BO75841 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.54□□□□□ -1.68
UPK1BO75841 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1BO75841 CR383656.5-201ENST00000547616 1340 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1BO75841 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1BO75841 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1BO75841 OR56A4-201ENST00000330728 1209 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 RNA5SP301-201ENST00000362537 121 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 RNA5SP85-201ENST00000365378 119 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 RNA5SP77-201ENST00000365394 120 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1BO75841 AC007068.1-201ENST00000396690 844 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1BO75841 AL096711.1-201ENST00000404780 554 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 AL512422.1-201ENST00000407033 553 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 AL139039.2-201ENST00000407436 479 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 RN7SKP108-201ENST00000411367 328 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 RPL21P108-201ENST00000413857 481 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.54□□□□□ -1.68
UPK1BO75841 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.54□□□□□ -1.68
UPK1BO75841 NMNAT1P2-201ENST00000435192 860 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.54□□□□□ -1.68
UPK1BO75841 AC068491.1-201ENST00000449539 1241 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.54□□□□□ -1.68
UPK1BO75841 AL035090.1-201ENST00000454835 332 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.54□□□□□ -1.68
UPK1BO75841 RPS12P20-201ENST00000464109 380 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.54□□□□□ -1.68
UPK1BO75841 RN7SL817P-201ENST00000480777 288 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.54□□□□□ -1.68
UPK1BO75841 PDPN-205ENST00000487038 607 ntTSL 2 BASIC4.54□□□□□ -1.68
UPK1BO75841 AC005412.2-201ENST00000492004 341 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 KATNBL1P4-201ENST00000503545 918 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 SCARNA6.1-201ENST00000516989 238 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.54□□□□□ -1.68
UPK1BO75841 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.54□□□□□ -1.68
UPK1BO75841 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.54□□□□□ -1.68
UPK1BO75841 RPL21P7-201ENST00000557463 483 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 LINC00556-201ENST00000569603 412 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1BO75841 AC025283.1-201ENST00000572039 734 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.54□□□□□ -1.68
UPK1BO75841 RN7SL708P-201ENST00000580952 299 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 AP005119.1-201ENST00000580956 292 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 AC063977.5-201ENST00000601044 974 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 AC073333.2-201ENST00000603589 769 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.54□□□□□ -1.68
UPK1BO75841 AL357153.4-201ENST00000620487 1016 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
UPK1BO75841 LYARP1-201ENST00000436977 1501 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
UPK1BO75841 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1BO75841 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1BO75841 AC009220.2-201ENST00000489759 1751 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1BO75841 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1BO75841 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.54□□□□□ -1.68
UPK1BO75841 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
UPK1BO75841 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1BO75841 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1BO75841 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1BO75841 CASC19-206ENST00000641028 1430 ntBASIC4.54□□□□□ -1.68
UPK1BO75841 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1BO75841 MAPK10-320ENST00000641462 6696 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UPK1BO75841 AL354854.1-201ENST00000455940 1363 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPK1BO75841 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
UPK1BO75841 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPK1BO75841 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.53□□□□□ -1.68
UPK1BO75841 AP000542.2-201ENST00000623199 6179 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPK1BO75841 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
UPK1BO75841 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.53□□□□□ -1.68
UPK1BO75841 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPK1BO75841 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPK1BO75841 AL121834.1-202ENST00000404494 277 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 AL390316.1-201ENST00000406279 553 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 SEPT7P8-201ENST00000413308 775 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK1BO75841 AL139148.1-201ENST00000427122 680 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK1BO75841 AC009238.2-201ENST00000431026 355 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.53□□□□□ -1.68
UPK1BO75841 RPL12P17-201ENST00000432393 498 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 AC023141.3-201ENST00000436698 278 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms