Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 OR7E125P-201ENST00000443450 846 ntBASIC2.27□□□□□ -2.05
USH2AO75445 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC2.27□□□□□ -2.05
USH2AO75445 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC2.27□□□□□ -2.05
USH2AO75445 AL391261.1-201ENST00000555712 1479 ntBASIC2.27□□□□□ -2.05
USH2AO75445 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC2.27□□□□□ -2.05
USH2AO75445 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
USH2AO75445 AC009951.1-201ENST00000623674 2614 ntBASIC2.27□□□□□ -2.05
USH2AO75445 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC2.27□□□□□ -2.05
USH2AO75445 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
USH2AO75445 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
USH2AO75445 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
USH2AO75445 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 RNA5SP397-201ENST00000391323 118 ntBASIC2.27□□□□□ -2.05
USH2AO75445 AL009179.1-201ENST00000406085 265 ntBASIC2.27□□□□□ -2.05
USH2AO75445 AC069157.1-201ENST00000421749 137 ntBASIC2.27□□□□□ -2.05
USH2AO75445 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC2.27□□□□□ -2.05
USH2AO75445 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC2.27□□□□□ -2.05
USH2AO75445 DHFRP1-201ENST00000579682 559 ntBASIC2.27□□□□□ -2.05
USH2AO75445 AP005131.7-201ENST00000610087 611 ntBASIC2.27□□□□□ -2.05
USH2AO75445 AL138960.1-201ENST00000613838 513 ntBASIC2.27□□□□□ -2.05
USH2AO75445 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 GK5-201ENST00000392993 9837 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 ST7-221ENST00000465133 2155 ntTSL 5 BASIC2.27□□□□□ -2.05
USH2AO75445 MIR554-201ENST00000384874 96 ntBASIC2.27□□□□□ -2.05
USH2AO75445 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.27□□□□□ -2.05
USH2AO75445 SLC4A1APP1-201ENST00000419995 602 ntBASIC2.27□□□□□ -2.05
USH2AO75445 TCEA1P1-201ENST00000449716 880 ntBASIC2.27□□□□□ -2.05
USH2AO75445 IGKV1OR22-5-201ENST00000458718 354 ntBASIC2.27□□□□□ -2.05
USH2AO75445 CSNK1A1P3-201ENST00000504105 330 ntBASIC2.27□□□□□ -2.05
USH2AO75445 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.27□□□□□ -2.05
USH2AO75445 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.27□□□□□ -2.05
USH2AO75445 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 RN7SL176P-201ENST00000580352 264 ntBASIC2.27□□□□□ -2.05
USH2AO75445 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.27□□□□□ -2.05
USH2AO75445 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 CIT-201ENST00000261833 8578 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC2.27□□□□□ -2.05
USH2AO75445 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
USH2AO75445 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC2.27□□□□□ -2.05
USH2AO75445 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
USH2AO75445 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC2.27□□□□□ -2.05
USH2AO75445 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC2.27□□□□□ -2.05
USH2AO75445 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 AC025031.4-201ENST00000621248 3271 ntBASIC2.26□□□□□ -2.05
USH2AO75445 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC2.26□□□□□ -2.05
USH2AO75445 OR4K15-201ENST00000305051 1216 ntBASIC2.26□□□□□ -2.05
USH2AO75445 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
USH2AO75445 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC2.26□□□□□ -2.05
USH2AO75445 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC2.26□□□□□ -2.05
USH2AO75445 ARL2BPP10-201ENST00000446487 531 ntBASIC2.26□□□□□ -2.05
USH2AO75445 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC2.26□□□□□ -2.05
USH2AO75445 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC2.26□□□□□ -2.05
USH2AO75445 OSTCP1-201ENST00000455507 450 ntBASIC2.26□□□□□ -2.05
USH2AO75445 RPS17P2-201ENST00000461663 408 ntBASIC2.26□□□□□ -2.05
USH2AO75445 AC093827.1-201ENST00000480094 861 ntBASIC2.26□□□□□ -2.05
USH2AO75445 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC2.26□□□□□ -2.05
USH2AO75445 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC2.26□□□□□ -2.05
USH2AO75445 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.26□□□□□ -2.05
USH2AO75445 AL513477.2-201ENST00000607858 568 ntBASIC2.26□□□□□ -2.05
USH2AO75445 AC015908.5-201ENST00000623289 343 ntBASIC2.26□□□□□ -2.05
USH2AO75445 AC087821.1-201ENST00000623639 567 ntBASIC2.26□□□□□ -2.05
USH2AO75445 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC2.26□□□□□ -2.05
USH2AO75445 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.26□□□□□ -2.05
USH2AO75445 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
USH2AO75445 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
USH2AO75445 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC2.26□□□□□ -2.05
USH2AO75445 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
USH2AO75445 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
USH2AO75445 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms