Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RN7SKP59-201ENST00000410520 314 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 BX510359.3-201ENST00000422168 306 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 MRPS21P2-201ENST00000424704 264 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AC006455.6-201ENST00000426192 893 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 USP24P1-201ENST00000433802 779 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 RSL24D1P8-201ENST00000434442 492 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AL450996.1-201ENST00000445574 1202 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 RAB28P3-201ENST00000448325 597 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 OR7E116P-201ENST00000448529 957 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AC239798.3-201ENST00000454459 408 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AC004129.2-201ENST00000457229 287 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AC098583.1-201ENST00000480875 255 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 OR52A4P-202ENST00000481634 799 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AC108693.1-201ENST00000496068 432 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 OR7E10P-201ENST00000526420 991 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 MIR1273E-201ENST00000581165 102 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AC013244.1-201ENST00000604279 193 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AC012213.4-201ENST00000606457 354 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AC015922.4-201ENST00000612568 690 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AL035661.1-201ENST00000620459 1144 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 LINC02019-201ENST00000608605 2060 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 RN7SKP162-201ENST00000363605 345 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 OR13C3-201ENST00000374781 1108 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 MIR1178-201ENST00000408396 91 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 RN7SKP278-201ENST00000410504 342 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 NPM1P4-201ENST00000414095 812 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 AC113412.1-201ENST00000425840 504 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 PRUNEP1-201ENST00000425846 705 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 AC092651.1-201ENST00000426110 312 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 AC012075.1-201ENST00000436549 580 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 BX679664.2-201ENST00000439282 283 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 TXNP2-201ENST00000443918 295 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 MORF4L1P4-201ENST00000450245 976 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 AL513343.1-201ENST00000451818 792 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 RPS23P2-201ENST00000463671 415 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 AL133445.1-201ENST00000467051 452 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 RN7SL184P-201ENST00000488308 297 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 BX510359.5-201ENST00000515651 304 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 AC008147.3-201ENST00000548666 354 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 AC051619.2-201ENST00000559063 397 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 RBM22P12-201ENST00000567098 1255 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 AC063977.5-201ENST00000601044 974 ntBASIC5.16□□□□□ -1.58
NPIPA3F8WFD2 AL021368.1-201ENST00000607490 540 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms