Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 FGF7P1-201ENST00000582820 288 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC006504.3-201ENST00000586818 523 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC020914.6-201ENST00000594327 272 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 OR5AH1P-201ENST00000595968 283 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC063962.1-201ENST00000608199 521 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC243830.2-201ENST00000618067 630 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AL157786.1-207ENST00000627771 695 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC009120.2-204ENST00000621548 2032 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 ZNF658B-201ENST00000602828 3408 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC119674.1-213ENST00000641177 1386 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC092646.2-201ENST00000431242 2095 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC135352.1-201ENST00000506173 1418 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AL139384.2-201ENST00000613809 3590 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 DDX50P1-201ENST00000438163 2400 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AC103591.2-201ENST00000265259 766 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 RPL21P132-201ENST00000331267 462 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 RNU5F-7P-201ENST00000363696 115 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 RN7SKP76-201ENST00000364419 323 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 Y_RNA.256-201ENST00000364594 104 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 SNORD115-47-201ENST00000391226 86 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AL161909.1-201ENST00000397390 712 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 MIR541-201ENST00000401360 84 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AC012498.1-201ENST00000424037 437 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 TRIM60P10Y-201ENST00000425589 751 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AL009174.1-201ENST00000426577 416 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AL365184.2-201ENST00000431139 435 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 TRIM60P8Y-201ENST00000436338 762 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AC114755.5-201ENST00000447760 831 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AP000542.1-201ENST00000448473 371 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 PMS2P11-201ENST00000451831 574 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 SNRPFP4-201ENST00000456366 242 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 RN7SL587P-201ENST00000459853 281 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AC090013.1-201ENST00000485147 480 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AP005202.1-201ENST00000489915 867 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 FTH1P8-201ENST00000498161 514 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 FAM92A1P2-202ENST00000504766 877 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AC098799.2-201ENST00000509466 868 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AC023794.3-204ENST00000510754 236 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 GLYATL1P4-201ENST00000529326 906 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AC124947.2-202ENST00000552735 133 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 MIR4301-201ENST00000577203 66 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AC112230.1-201ENST00000604342 547 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 RNU4-89P-201ENST00000607443 133 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms