Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC008115.3-201ENST00000614874 549 ntBASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 RNA5SP439-201ENST00000617595 124 ntBASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 AP001284.1-201ENST00000528393 2118 ntBASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 RN7SKP185-201ENST00000362813 326 ntBASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 AL596448.1-201ENST00000415024 392 ntBASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 BMS1P17-202ENST00000416720 316 ntBASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 AL133173.1-201ENST00000423458 397 ntBASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 AC099670.2-201ENST00000435130 321 ntBASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 FMO7P-201ENST00000436045 768 ntBASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 CYCSP51-201ENST00000443545 318 ntBASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 AL450023.1-201ENST00000450868 751 ntBASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 VDAC2P4-201ENST00000452925 711 ntBASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 RN7SL583P-201ENST00000475692 287 ntBASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 NPM1P28-201ENST00000492269 840 ntBASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 AC097486.1-201ENST00000515331 210 ntBASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 AC022404.1-201ENST00000555320 273 ntBASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.26□□□□□ -1.57
ATG4BQ9Y4P1 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 GAPDHP42-201ENST00000406848 981 ntBASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 OR6E1P-201ENST00000414424 923 ntBASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 RIMKLBP2-201ENST00000424737 654 ntBASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 RPL7P56-201ENST00000429441 717 ntBASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 AC138761.5-201ENST00000433967 325 ntBASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 AZGP1P2-201ENST00000454506 345 ntBASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 LDHBP2-201ENST00000456969 1005 ntBASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 RPSAP39-201ENST00000467439 883 ntBASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 AL049872.1-201ENST00000556323 322 ntBASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 SNORD95-201ENST00000579879 68 ntBASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 MIR4505-201ENST00000582238 73 ntBASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 H3F3BP2-201ENST00000583907 357 ntBASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 AC002069.2-201ENST00000603580 883 ntBASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 PPATP2-201ENST00000605635 508 ntBASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 FAM72A-208ENST00000607379 1139 ntBASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 AC004477.3-201ENST00000614061 590 ntBASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 AC107905.1-201ENST00000616204 426 ntBASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 CU639417.4-201ENST00000623928 207 ntBASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms