Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 NDUFA5P10-201ENST00000432147 357 ntBASIC8.13□□□□□ -1.11
USP35Q9P2H5 GAPDHP23-201ENST00000444823 993 ntBASIC8.13□□□□□ -1.11
USP35Q9P2H5 MOB1AP2-201ENST00000446060 614 ntBASIC8.13□□□□□ -1.11
USP35Q9P2H5 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC8.13□□□□□ -1.11
USP35Q9P2H5 AL133445.1-201ENST00000467051 452 ntBASIC8.13□□□□□ -1.11
USP35Q9P2H5 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USP35Q9P2H5 PFN1P6-201ENST00000476786 399 ntBASIC8.13□□□□□ -1.11
USP35Q9P2H5 RN7SL205P-201ENST00000490174 284 ntBASIC8.13□□□□□ -1.11
USP35Q9P2H5 AC108693.1-201ENST00000496068 432 ntBASIC8.13□□□□□ -1.11
USP35Q9P2H5 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC8.13□□□□□ -1.11
USP35Q9P2H5 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC8.13□□□□□ -1.11
USP35Q9P2H5 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC8.13□□□□□ -1.11
USP35Q9P2H5 AC006530.1-201ENST00000555980 571 ntBASIC8.13□□□□□ -1.11
USP35Q9P2H5 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC8.13□□□□□ -1.11
USP35Q9P2H5 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC8.13□□□□□ -1.11
USP35Q9P2H5 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC8.13□□□□□ -1.11
USP35Q9P2H5 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC8.13□□□□□ -1.11
USP35Q9P2H5 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USP35Q9P2H5 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
USP35Q9P2H5 RLIMP2-201ENST00000427891 1563 ntBASIC8.13□□□□□ -1.11
USP35Q9P2H5 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC8.13□□□□□ -1.11
USP35Q9P2H5 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USP35Q9P2H5 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC8.13□□□□□ -1.11
USP35Q9P2H5 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
USP35Q9P2H5 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
USP35Q9P2H5 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC8.12□□□□□ -1.11
USP35Q9P2H5 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USP35Q9P2H5 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
USP35Q9P2H5 AC025470.1-201ENST00000510053 2032 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 CREM-217ENST00000439705 2306 ntTSL 5 BASIC8.12□□□□□ -1.11
USP35Q9P2H5 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USP35Q9P2H5 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USP35Q9P2H5 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USP35Q9P2H5 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
USP35Q9P2H5 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USP35Q9P2H5 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
USP35Q9P2H5 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USP35Q9P2H5 ATP5F1P6-201ENST00000402768 767 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 SNRPEP6-201ENST00000407465 277 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 AL023284.3-201ENST00000407767 334 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 RN7SKP59-201ENST00000410520 314 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC8.12□□□□□ -1.11
USP35Q9P2H5 OR2AT2P-201ENST00000413438 905 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 TATDN1P1-201ENST00000414123 891 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 AC097721.1-201ENST00000427150 1253 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 AL160175.1-201ENST00000428124 247 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 BX119904.1-201ENST00000432026 348 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 EEF1B2P6-201ENST00000445713 673 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC8.12□□□□□ -1.11
USP35Q9P2H5 SLC25A51P1-201ENST00000468432 871 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 SNRPCP3-201ENST00000474888 476 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 AC090058.1-201ENST00000498788 435 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 NPM1P27-201ENST00000502784 830 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC8.12□□□□□ -1.11
USP35Q9P2H5 AP003102.1-201ENST00000525638 661 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
USP35Q9P2H5 AC122134.1-202ENST00000569111 1201 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 AC027216.1-201ENST00000577726 685 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
USP35Q9P2H5 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC8.12□□□□□ -1.11
USP35Q9P2H5 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC8.12□□□□□ -1.11
USP35Q9P2H5 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC8.12□□□□□ -1.11
USP35Q9P2H5 AC073137.1-201ENST00000605636 634 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 AL135786.2-201ENST00000608422 615 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 AL021918.2-201ENST00000613415 194 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 AL445670.1-201ENST00000618889 801 ntBASIC8.12□□□□□ -1.11
USP35Q9P2H5 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USP35Q9P2H5 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC8.12□□□□□ -1.11
USP35Q9P2H5 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USP35Q9P2H5 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USP35Q9P2H5 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USP35Q9P2H5 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USP35Q9P2H5 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC8.12□□□□□ -1.11
USP35Q9P2H5 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
USP35Q9P2H5 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USP35Q9P2H5 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
USP35Q9P2H5 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USP35Q9P2H5 TANK-205ENST00000405852 2155 ntTSL 5 BASIC8.11□□□□□ -1.11
USP35Q9P2H5 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USP35Q9P2H5 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
USP35Q9P2H5 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
USP35Q9P2H5 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC8.11□□□□□ -1.11
USP35Q9P2H5 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
USP35Q9P2H5 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC8.11□□□□□ -1.11
USP35Q9P2H5 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.11□□□□□ -1.11
USP35Q9P2H5 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USP35Q9P2H5 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
USP35Q9P2H5 GAPDHP24-201ENST00000328713 983 ntBASIC8.11□□□□□ -1.11
USP35Q9P2H5 SNORA64.1-201ENST00000362600 132 ntBASIC8.11□□□□□ -1.11
USP35Q9P2H5 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC8.11□□□□□ -1.11
USP35Q9P2H5 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
USP35Q9P2H5 HMGB1P20-201ENST00000402555 677 ntBASIC8.11□□□□□ -1.11
USP35Q9P2H5 UQCRFS1P3-201ENST00000407697 385 ntBASIC8.11□□□□□ -1.11
USP35Q9P2H5 HMGA1P8-201ENST00000414130 321 ntBASIC8.11□□□□□ -1.11
USP35Q9P2H5 RPL35AP3-201ENST00000414680 288 ntBASIC8.11□□□□□ -1.11
USP35Q9P2H5 AL590806.1-201ENST00000415818 853 ntBASIC8.11□□□□□ -1.11
USP35Q9P2H5 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC8.11□□□□□ -1.11
USP35Q9P2H5 AC126120.1-201ENST00000431082 470 ntBASIC8.11□□□□□ -1.11
USP35Q9P2H5 CFL1P1-202ENST00000432948 411 ntBASIC8.11□□□□□ -1.11
USP35Q9P2H5 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms