Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 IGBP1P1-201ENST00000554337 1009 ntBASIC6.53□□□□□ -1.36
UPF2Q9HAU5 AC093591.2-201ENST00000565254 3843 ntBASIC6.53□□□□□ -1.36
UPF2Q9HAU5 MIR3154-201ENST00000577829 84 ntBASIC6.53□□□□□ -1.36
UPF2Q9HAU5 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 AC129778.1-202ENST00000623812 261 ntBASIC6.53□□□□□ -1.36
UPF2Q9HAU5 AL591379.1-207ENST00000635982 261 ntBASIC6.53□□□□□ -1.36
UPF2Q9HAU5 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.53□□□□□ -1.36
UPF2Q9HAU5 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
UPF2Q9HAU5 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
UPF2Q9HAU5 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
UPF2Q9HAU5 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
UPF2Q9HAU5 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
UPF2Q9HAU5 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.52□□□□□ -1.37
UPF2Q9HAU5 AC097063.1-201ENST00000426714 1797 ntBASIC6.52□□□□□ -1.37
UPF2Q9HAU5 AC100778.3-201ENST00000580060 1750 ntBASIC6.52□□□□□ -1.37
UPF2Q9HAU5 AC023421.1-201ENST00000590535 1785 ntBASIC6.52□□□□□ -1.37
UPF2Q9HAU5 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
UPF2Q9HAU5 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.52□□□□□ -1.37
UPF2Q9HAU5 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
UPF2Q9HAU5 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
UPF2Q9HAU5 GAPDHP42-201ENST00000406848 981 ntBASIC6.52□□□□□ -1.37
UPF2Q9HAU5 AP000547.1-201ENST00000454360 617 ntBASIC6.52□□□□□ -1.37
UPF2Q9HAU5 RPS23P6-201ENST00000466136 431 ntBASIC6.52□□□□□ -1.37
UPF2Q9HAU5 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
UPF2Q9HAU5 NIFKP7-201ENST00000503365 834 ntBASIC6.52□□□□□ -1.37
UPF2Q9HAU5 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.52□□□□□ -1.37
UPF2Q9HAU5 LSM3P2-201ENST00000551246 273 ntBASIC6.52□□□□□ -1.37
UPF2Q9HAU5 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.52□□□□□ -1.37
UPF2Q9HAU5 DPPA2P4-201ENST00000563717 878 ntBASIC6.52□□□□□ -1.37
UPF2Q9HAU5 AC138207.8-204ENST00000579588 527 ntBASIC6.52□□□□□ -1.37
UPF2Q9HAU5 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.52□□□□□ -1.37
UPF2Q9HAU5 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
UPF2Q9HAU5 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
UPF2Q9HAU5 PPATP2-201ENST00000605635 508 ntBASIC6.52□□□□□ -1.37
UPF2Q9HAU5 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.52□□□□□ -1.37
UPF2Q9HAU5 AP000648.2-201ENST00000624182 404 ntBASIC6.52□□□□□ -1.37
UPF2Q9HAU5 AC009950.2-201ENST00000636548 183 ntBASIC6.52□□□□□ -1.37
UPF2Q9HAU5 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
UPF2Q9HAU5 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
UPF2Q9HAU5 CASC19-248ENST00000641674 1356 ntBASIC6.52□□□□□ -1.37
UPF2Q9HAU5 THAP12P5-201ENST00000405864 2275 ntBASIC6.52□□□□□ -1.37
UPF2Q9HAU5 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.52□□□□□ -1.37
UPF2Q9HAU5 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
UPF2Q9HAU5 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
UPF2Q9HAU5 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
UPF2Q9HAU5 AC005261.2-201ENST00000593427 4258 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 SYT14P1-202ENST00000600441 1448 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
UPF2Q9HAU5 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
UPF2Q9HAU5 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
UPF2Q9HAU5 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
UPF2Q9HAU5 RNA5SP477-201ENST00000362639 119 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 RNA5SP232-201ENST00000364144 119 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 RNA5SP223-201ENST00000365174 120 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
UPF2Q9HAU5 AC093166.3-201ENST00000448785 303 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 AL672138.1-201ENST00000450604 1015 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 DNAJB5P1-201ENST00000454004 806 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.51□□□□□ -1.37
UPF2Q9HAU5 CBX1P5-201ENST00000475330 559 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 RPL7P41-201ENST00000485823 957 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 RNU6-615P-201ENST00000516065 106 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 SCARNA16.4-201ENST00000516956 187 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 EIF4EP5-201ENST00000528228 640 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.51□□□□□ -1.37
UPF2Q9HAU5 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.51□□□□□ -1.37
UPF2Q9HAU5 AL845552.1-201ENST00000556820 323 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.51□□□□□ -1.37
UPF2Q9HAU5 AC016839.1-201ENST00000578162 867 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 MIR4433B-201ENST00000581329 102 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 AC015802.2-201ENST00000589690 189 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 AC016252.1-201ENST00000609721 474 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.51□□□□□ -1.37
UPF2Q9HAU5 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.51□□□□□ -1.37
UPF2Q9HAU5 AC008691.1-209ENST00000642094 814 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
UPF2Q9HAU5 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.51□□□□□ -1.37
UPF2Q9HAU5 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
UPF2Q9HAU5 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
UPF2Q9HAU5 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
UPF2Q9HAU5 SRRM1P3-201ENST00000426911 2678 ntBASIC6.51□□□□□ -1.37
UPF2Q9HAU5 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 AC090220.1-201ENST00000593078 1699 ntBASIC6.5□□□□□ -1.37
UPF2Q9HAU5 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms