Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 RNU6-553P-201ENST00000364047 96 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 LCN1P2-201ENST00000372030 223 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 OR5H15-201ENST00000383696 930 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 SNORD94-201ENST00000386037 137 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 ERHP2-201ENST00000402323 299 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 RN7SKP161-201ENST00000411110 305 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 CDY17P-201ENST00000414121 1282 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 ELOCP17-201ENST00000414751 326 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 RPL7P53-201ENST00000421245 739 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 GTF2IP2-201ENST00000424290 697 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 CDY8P-201ENST00000428380 1279 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 RPS10P21-201ENST00000430654 475 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 MTND1P32-201ENST00000433043 938 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 LDHAP2-201ENST00000437325 985 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 COX7BP2-201ENST00000437976 242 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 E2F6P3-201ENST00000441743 743 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AC092601.1-201ENST00000444526 383 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AL929288.2-201ENST00000446368 407 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 CDY20P-201ENST00000447528 1279 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 RPL23AP28-201ENST00000448062 470 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 GTF2IP12-201ENST00000456547 356 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 SRRM1P2-201ENST00000464531 1192 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AP003385.3-201ENST00000472498 287 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 MINOS1P4-201ENST00000515470 318 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 DEFB130C-202ENST00000530001 230 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AC073916.1-201ENST00000545095 130 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AC011611.5-201ENST00000552477 578 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AC087465.1-201ENST00000560574 245 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AC005726.4-201ENST00000582858 458 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AC106791.2-201ENST00000604680 391 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AL513477.2-201ENST00000607858 568 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AC009237.15-201ENST00000610252 501 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AC068944.2-201ENST00000610373 403 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AL162574.1-201ENST00000615702 950 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AC018755.4-201ENST00000619715 454 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 ZNF806-201ENST00000438300 1774 ntBASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
FOXP3Q9BZS1 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC027514.1-201ENST00000588561 1603 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC011455.2-201ENST00000599320 3336 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC023490.2-201ENST00000359859 470 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 SNORA38B-201ENST00000363524 131 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 RN7SKP189-201ENST00000365042 330 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 SNORD116.1-201ENST00000365628 92 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 SNORA7A-201ENST00000384765 139 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 RAP1BP3-201ENST00000407180 549 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 RNA5SP115-201ENST00000411160 107 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 HMGA1P8-201ENST00000414130 321 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC000089.1-201ENST00000424559 801 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AL365220.1-201ENST00000432923 399 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AL031681.1-201ENST00000443304 400 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 VN1R38P-201ENST00000450265 887 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC233982.1-201ENST00000451247 436 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC099670.1-201ENST00000455141 783 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 RN7SL654P-201ENST00000479178 292 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 MTCYBP44-201ENST00000514835 823 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms