Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PKP4Q99569 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PKP4Q99569 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PKP4Q99569 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.54□□□□□ -1.52
PKP4Q99569 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
PKP4Q99569 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PKP4Q99569 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PKP4Q99569 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
PKP4Q99569 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
PKP4Q99569 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.54□□□□□ -1.52
PKP4Q99569 SNORA64.1-201ENST00000362600 132 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 RNA5SP394-201ENST00000364216 119 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 RNU1-136P-201ENST00000384181 164 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PKP4Q99569 HMGB1P20-201ENST00000402555 677 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 RPS3AP2-201ENST00000407190 754 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.54□□□□□ -1.52
PKP4Q99569 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.54□□□□□ -1.52
PKP4Q99569 RNGTTP1-201ENST00000420965 728 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 RPS10P18-201ENST00000442662 495 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.54□□□□□ -1.52
PKP4Q99569 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.54□□□□□ -1.52
PKP4Q99569 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.54□□□□□ -1.52
PKP4Q99569 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.54□□□□□ -1.52
PKP4Q99569 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.54□□□□□ -1.52
PKP4Q99569 CYCSP53-201ENST00000455540 265 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.54□□□□□ -1.52
PKP4Q99569 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.54□□□□□ -1.52
PKP4Q99569 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PKP4Q99569 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.54□□□□□ -1.52
PKP4Q99569 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.54□□□□□ -1.52
PKP4Q99569 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PKP4Q99569 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.54□□□□□ -1.52
PKP4Q99569 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PKP4Q99569 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.54□□□□□ -1.52
PKP4Q99569 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.54□□□□□ -1.52
PKP4Q99569 HMGB1P42-201ENST00000532126 553 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 HSPE1P2-201ENST00000554777 306 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 AC090888.3-201ENST00000558917 509 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 AGGF1P7-201ENST00000562369 913 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.54□□□□□ -1.52
PKP4Q99569 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.54□□□□□ -1.52
PKP4Q99569 AC009303.3-201ENST00000591103 736 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 AC010487.1-201ENST00000594408 1172 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 RPAP2P1-201ENST00000603626 1168 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 AL592494.3-201ENST00000609485 464 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 AC008833.1-201ENST00000611633 691 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PKP4Q99569 AC104307.1-201ENST00000616142 196 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 AL590410.1-201ENST00000617925 333 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PKP4Q99569 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.54□□□□□ -1.52
PKP4Q99569 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
PKP4Q99569 AC087565.3-203ENST00000641018 837 ntBASIC5.54□□□□□ -1.52
PKP4Q99569 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PKP4Q99569 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
PKP4Q99569 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
PKP4Q99569 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PKP4Q99569 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PKP4Q99569 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.54□□□□□ -1.52
PKP4Q99569 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PKP4Q99569 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
PKP4Q99569 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PKP4Q99569 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.54□□□□□ -1.52
PKP4Q99569 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PKP4Q99569 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PKP4Q99569 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PKP4Q99569 AL606537.1-201ENST00000607258 2011 ntBASIC5.53□□□□□ -1.52
PKP4Q99569 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PKP4Q99569 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.53□□□□□ -1.52
PKP4Q99569 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PKP4Q99569 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.53□□□□□ -1.52
PKP4Q99569 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PKP4Q99569 NLRP3P1-201ENST00000622303 1785 ntBASIC5.53□□□□□ -1.52
PKP4Q99569 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.53□□□□□ -1.52
PKP4Q99569 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PKP4Q99569 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.53□□□□□ -1.52
PKP4Q99569 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PKP4Q99569 MIR1282-201ENST00000408865 101 ntBASIC5.53□□□□□ -1.52
PKP4Q99569 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.53□□□□□ -1.52
PKP4Q99569 NENFP1-201ENST00000419476 466 ntBASIC5.53□□□□□ -1.52
PKP4Q99569 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.53□□□□□ -1.52
PKP4Q99569 AC114878.1-201ENST00000441166 358 ntBASIC5.53□□□□□ -1.52
PKP4Q99569 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.53□□□□□ -1.52
PKP4Q99569 AL445665.1-202ENST00000452436 324 ntBASIC5.53□□□□□ -1.52
PKP4Q99569 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.53□□□□□ -1.52
PKP4Q99569 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.53□□□□□ -1.52
PKP4Q99569 AC084754.1-201ENST00000463466 464 ntBASIC5.53□□□□□ -1.52
PKP4Q99569 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.53□□□□□ -1.52
PKP4Q99569 PSMA2P2-201ENST00000504319 686 ntBASIC5.53□□□□□ -1.52
PKP4Q99569 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.53□□□□□ -1.52
PKP4Q99569 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.53□□□□□ -1.52
PKP4Q99569 AC117525.1-201ENST00000515228 503 ntBASIC5.53□□□□□ -1.52
PKP4Q99569 SNORA70.11-201ENST00000515987 138 ntBASIC5.53□□□□□ -1.52
PKP4Q99569 RNU6-319P-201ENST00000516025 108 ntBASIC5.53□□□□□ -1.52
PKP4Q99569 SNORA70.13-201ENST00000516116 138 ntBASIC5.53□□□□□ -1.52
PKP4Q99569 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.53□□□□□ -1.52
PKP4Q99569 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.53□□□□□ -1.52
PKP4Q99569 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.53□□□□□ -1.52
PKP4Q99569 AC079600.1-201ENST00000550326 297 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms