Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 RNU6-1339P-201ENST00000363574 91 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 RNA5SP114-201ENST00000363780 113 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 RN7SKP55-201ENST00000364888 307 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 OR1L1-202ENST00000373686 1083 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 MIR27A-201ENST00000385073 78 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AC006511.2-201ENST00000388966 660 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 VDAC2P1-201ENST00000399358 958 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 CEACAMP8-201ENST00000413902 580 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 MRPS36P1-201ENST00000421291 307 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 MTND4LP11-201ENST00000422184 280 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 CENPIP1-201ENST00000425713 902 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 DPY19L1P2-201ENST00000426647 915 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AL645936.2-201ENST00000430565 928 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 OR51P1P-201ENST00000447547 942 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 FAR2P1-206ENST00000449736 709 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 OR7E7P-201ENST00000455678 1012 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 SRP68P2-201ENST00000456184 254 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 MED28P7-201ENST00000456611 530 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 GYG1P1-201ENST00000460864 698 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AC117395.1-201ENST00000487390 403 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 PFN1P8-201ENST00000497012 543 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AC112198.1-201ENST00000505369 1220 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AC110775.1-201ENST00000513721 462 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 SCARNA6-201ENST00000515982 265 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 RNA5SP318-201ENST00000516352 92 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 TBCA-206ENST00000518338 551 ntTSL 2 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AP004607.5-201ENST00000532034 217 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 SLC25A51P2-201ENST00000535708 889 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 NIFKP8-201ENST00000560500 874 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AC022146.1-201ENST00000595307 847 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AC092032.1-201ENST00000603090 165 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AC063962.1-201ENST00000608199 521 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AC073534.2-201ENST00000620377 381 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AC087894.3-201ENST00000623682 349 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.9□□□□□ -1.3
PHC3Q8NDX5 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.9□□□□□ -1.3
PHC3Q8NDX5 AC020978.6-201ENST00000571197 3177 ntBASIC6.9□□□□□ -1.31
PHC3Q8NDX5 AC100871.1-201ENST00000507871 1456 ntBASIC6.9□□□□□ -1.31
PHC3Q8NDX5 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.9□□□□□ -1.31
PHC3Q8NDX5 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.9□□□□□ -1.31
PHC3Q8NDX5 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PHC3Q8NDX5 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.89□□□□□ -1.31
PHC3Q8NDX5 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PHC3Q8NDX5 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.89□□□□□ -1.31
PHC3Q8NDX5 AP002800.1-201ENST00000624982 2225 ntBASIC6.89□□□□□ -1.31
PHC3Q8NDX5 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
PHC3Q8NDX5 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.89□□□□□ -1.31
PHC3Q8NDX5 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PHC3Q8NDX5 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PHC3Q8NDX5 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.89□□□□□ -1.31
PHC3Q8NDX5 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PHC3Q8NDX5 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PHC3Q8NDX5 RNA5SP512-201ENST00000364550 120 ntBASIC6.89□□□□□ -1.31
PHC3Q8NDX5 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PHC3Q8NDX5 Y_RNA.517-201ENST00000384551 106 ntBASIC6.89□□□□□ -1.31
PHC3Q8NDX5 MIR138-2-201ENST00000384916 84 ntBASIC6.89□□□□□ -1.31
PHC3Q8NDX5 RNA5SP53-201ENST00000391299 120 ntBASIC6.89□□□□□ -1.31
PHC3Q8NDX5 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PHC3Q8NDX5 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
PHC3Q8NDX5 SLC9B1P2-201ENST00000398120 1184 ntBASIC6.89□□□□□ -1.31
PHC3Q8NDX5 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.89□□□□□ -1.31
PHC3Q8NDX5 RNU2-16P-201ENST00000410712 136 ntBASIC6.89□□□□□ -1.31
PHC3Q8NDX5 RPS15AP38-201ENST00000413110 372 ntBASIC6.89□□□□□ -1.31
PHC3Q8NDX5 OR6K4P-201ENST00000423179 955 ntBASIC6.89□□□□□ -1.31
PHC3Q8NDX5 CYP4F32P-201ENST00000426492 504 ntBASIC6.89□□□□□ -1.31
PHC3Q8NDX5 AL022331.1-201ENST00000429025 477 ntBASIC6.89□□□□□ -1.31
PHC3Q8NDX5 RPL7P29-201ENST00000437151 728 ntBASIC6.89□□□□□ -1.31
PHC3Q8NDX5 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.89□□□□□ -1.31
PHC3Q8NDX5 SDHCP3-201ENST00000445371 506 ntBASIC6.89□□□□□ -1.31
PHC3Q8NDX5 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms