Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS13CQ709C8 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
VPS13CQ709C8 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS13CQ709C8 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS13CQ709C8 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 AC079922.1-201ENST00000443291 359 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 SNORA84-201ENST00000459229 133 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 NIFKP7-201ENST00000503365 834 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 AC083829.1-201ENST00000503756 657 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 AC008958.1-201ENST00000511047 682 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 ENPP7P9-201ENST00000514456 627 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS13CQ709C8 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS13CQ709C8 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS13CQ709C8 ITPK1-AS1-201ENST00000553639 4701 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS13CQ709C8 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS13CQ709C8 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS13CQ709C8 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS13CQ709C8 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS13CQ709C8 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS13CQ709C8 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 Y_RNA.333-201ENST00000365274 102 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS13CQ709C8 MEMO1P4-201ENST00000453590 386 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 AP003080.1-202ENST00000526526 915 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 MIR4301-201ENST00000577203 66 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 AL353729.2-201ENST00000605859 1249 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 AL121873.1-201ENST00000616013 524 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS13CQ709C8 AC083899.1-201ENST00000454465 3819 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS13CQ709C8 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS13CQ709C8 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS13CQ709C8 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS13CQ709C8 NSF-206ENST00000575068 2667 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS13CQ709C8 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 RNA5SP464-201ENST00000516251 108 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 RNU1-45P-201ENST00000517191 141 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 IGKV2D-10-201ENST00000520194 281 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 AC112200.1-201ENST00000625015 234 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS13CQ709C8 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS13CQ709C8 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 LRRC37A4P-202ENST00000581296 5372 ntBASIC4.17□□□□□ -1.74
VPS13CQ709C8 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS13CQ709C8 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 RNU1-13P-201ENST00000384499 162 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 AC006946.1-201ENST00000429106 328 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 AL161722.2-201ENST00000434731 981 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 AC097523.2-201ENST00000435551 652 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 NDUFA5P8-201ENST00000449019 346 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 AURKAPS2-201ENST00000454983 333 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 HMGB1P4-201ENST00000455362 567 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 AC002044.3-201ENST00000623314 541 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 SNORD56.6-201ENST00000384569 71 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 BMS1P19-201ENST00000433925 393 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms