Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 Y_RNA.263-201ENST00000364659 114 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 RNU1-84P-201ENST00000365447 164 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 RPL5P20-201ENST00000403848 896 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 CYCSP17-201ENST00000407870 315 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 RPS4XP16-201ENST00000427198 791 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 AC242426.1-201ENST00000435270 960 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 RPL36AP33-201ENST00000450395 310 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 RNA5SP269-201ENST00000459032 137 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 AC018638.3-201ENST00000461273 132 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 AL672167.3-201ENST00000465951 960 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 RN7SL221P-201ENST00000466190 281 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 RPL9P6-201ENST00000492764 598 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 CBX1-205ENST00000495350 550 ntTSL 2 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 AP000619.3-201ENST00000535634 1127 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 AC124947.2-202ENST00000552735 133 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 AC093524.1-201ENST00000564266 1094 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 AL390816.3-201ENST00000604527 1066 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 AL049634.3-201ENST00000604968 457 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 AC018714.1-201ENST00000605028 208 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 AC010205.1-201ENST00000616668 449 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 AL357080.1-201ENST00000617394 239 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 PCMTD1P7-201ENST00000634506 357 ntBASIC8.59□□□□□ -1.03
RC3H1Q5TC82 UOX-205ENST00000640983 544 ntTSL 4 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 CD86-209ENST00000493101 1572 ntTSL 2 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 HCG18-244ENST00000602516 2890 ntBASIC8.59□□□□□ -1.04
RC3H1Q5TC82 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
RC3H1Q5TC82 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 RNU6-500P-201ENST00000362349 107 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 RNU1-87P-201ENST00000363727 170 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 RNU6-1227P-201ENST00000383981 107 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 RN7SKP62-201ENST00000384539 329 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 RNU6-932P-201ENST00000391108 106 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AC005522.1-201ENST00000395416 346 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 RPL21P108-201ENST00000413857 481 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AL035422.1-201ENST00000414193 397 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AC009784.1-201ENST00000426484 460 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AC110602.1-201ENST00000437414 318 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 RPS27P5-201ENST00000444247 244 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AL034399.1-201ENST00000451535 380 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 GLRXP3-201ENST00000470810 321 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 MTCO1P35-201ENST00000515270 228 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 RPL3P13-201ENST00000550415 216 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AC013553.2-201ENST00000604244 589 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AC135507.2-201ENST00000612443 309 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AC002553.4-201ENST00000616896 331 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AC139769.3-201ENST00000618383 175 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AC138305.3-201ENST00000624988 240 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 LINC00663-203ENST00000586885 2546 ntBASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms