Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VARS2Q5ST30 AC105342.1-201ENST00000378334 6848 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 AC005520.1-201ENST00000556551 3695 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VARS2Q5ST30 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 AL591848.3-201ENST00000570141 2968 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 GSTM2-204ENST00000369831 1730 ntTSL 2 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
VARS2Q5ST30 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VARS2Q5ST30 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC068044.1-201ENST00000441585 1978 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 DNAH10-209ENST00000614082 3484 ntTSL 5 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VARS2Q5ST30 SOCS6-203ENST00000582322 2625 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
VARS2Q5ST30 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 ZMAT4-201ENST00000297737 2466 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 SEC63P2-201ENST00000503863 1939 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 SNORA30-201ENST00000384028 129 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 U3.18-201ENST00000390880 216 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 AL591416.1-201ENST00000404015 867 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 RN7SKP129-201ENST00000410288 299 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC073335.1-201ENST00000427776 363 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 HBBP1-201ENST00000433329 439 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC015983.1-201ENST00000441577 373 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC002553.2-201ENST00000453217 340 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 PSAT1P4-201ENST00000466500 526 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 AL122013.1-201ENST00000473054 801 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 CREM-234ENST00000484283 660 ntTSL 5 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
VARS2Q5ST30 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC112204.1-201ENST00000502591 103 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC025465.3-201ENST00000510570 311 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 RNU6-1023P-201ENST00000516137 106 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC008562.1-201ENST00000521763 330 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
VARS2Q5ST30 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 MRPL40P1-201ENST00000542687 604 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 NMNAT1P1-201ENST00000554095 876 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC005726.4-201ENST00000582858 458 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC010327.2-201ENST00000587647 488 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 RPL23AP77-201ENST00000588044 463 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 ACP5-208ENST00000590420 301 ntTSL 5 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 AL451085.1-201ENST00000604546 690 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 AL683813.2-201ENST00000605245 502 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 MIR6745-201ENST00000612694 127 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 TUG1_3.1-201ENST00000616187 237 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 CLUHP10-201ENST00000631979 980 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 RPL36AP21-202ENST00000639134 430 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
VARS2Q5ST30 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 PSG3-204ENST00000595140 1724 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC011369.1-201ENST00000517408 2181 ntTSL 3 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
VARS2Q5ST30 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC073349.2-201ENST00000427545 1603 ntBASIC8.53□□□□□ -1.04
VARS2Q5ST30 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 GJB2-201ENST00000382844 2309 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
VARS2Q5ST30 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VARS2Q5ST30 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VARS2Q5ST30 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
VARS2Q5ST30 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC8.53□□□□□ -1.04
VARS2Q5ST30 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC8.52□□□□□ -1.04
VARS2Q5ST30 MBP-206ENST00000397863 4800 ntTSL 3 BASIC8.52□□□□□ -1.04
VARS2Q5ST30 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
VARS2Q5ST30 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
VARS2Q5ST30 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
VARS2Q5ST30 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
VARS2Q5ST30 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms