Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN12P56749 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.66□□□□□ -1.66
CLDN12P56749 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.66□□□□□ -1.66
CLDN12P56749 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLDN12P56749 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CLDN12P56749 CASC19-255ENST00000641733 1385 ntBASIC4.65□□□□□ -1.66
CLDN12P56749 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CLDN12P56749 AC100778.3-201ENST00000580060 1750 ntBASIC4.65□□□□□ -1.66
CLDN12P56749 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLDN12P56749 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CLDN12P56749 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLDN12P56749 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLDN12P56749 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
CLDN12P56749 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLDN12P56749 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLDN12P56749 RNU1-19P-201ENST00000363306 165 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 MIR137-201ENST00000385223 102 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN12P56749 RNU2-18P-201ENST00000411224 162 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 CTSL3P-202ENST00000412179 788 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 NPM1P40-201ENST00000412758 733 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.65□□□□□ -1.67
CLDN12P56749 AL022331.1-201ENST00000429025 477 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.65□□□□□ -1.67
CLDN12P56749 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.65□□□□□ -1.67
CLDN12P56749 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.65□□□□□ -1.67
CLDN12P56749 AC018797.1-201ENST00000510791 255 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 AC114781.3-201ENST00000512083 142 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 OR5H7P-201ENST00000514084 930 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.65□□□□□ -1.67
CLDN12P56749 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.65□□□□□ -1.67
CLDN12P56749 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 HMGB1P42-201ENST00000532126 553 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.65□□□□□ -1.67
CLDN12P56749 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.65□□□□□ -1.67
CLDN12P56749 AC079905.1-201ENST00000549280 475 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 AC121758.1-202ENST00000556917 658 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 DPPA2P4-201ENST00000563717 878 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.65□□□□□ -1.67
CLDN12P56749 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.65□□□□□ -1.67
CLDN12P56749 CCDC58P1-201ENST00000578567 430 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.65□□□□□ -1.67
CLDN12P56749 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.65□□□□□ -1.67
CLDN12P56749 MIR3936-201ENST00000584304 110 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC4.65□□□□□ -1.67
CLDN12P56749 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.65□□□□□ -1.67
CLDN12P56749 MIR6839-201ENST00000620425 113 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 AC010809.3-201ENST00000621310 641 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.65□□□□□ -1.67
CLDN12P56749 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN12P56749 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN12P56749 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN12P56749 SRRM1P3-201ENST00000426911 2678 ntBASIC4.65□□□□□ -1.67
CLDN12P56749 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CLDN12P56749 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.65□□□□□ -1.67
CLDN12P56749 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CLDN12P56749 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN12P56749 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN12P56749 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN12P56749 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN12P56749 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CLDN12P56749 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.64□□□□□ -1.67
CLDN12P56749 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.64□□□□□ -1.67
CLDN12P56749 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.64□□□□□ -1.67
CLDN12P56749 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN12P56749 COX6B1P3-201ENST00000312310 260 ntBASIC4.64□□□□□ -1.67
CLDN12P56749 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN12P56749 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CLDN12P56749 RNU1-150P-201ENST00000362491 162 ntBASIC4.64□□□□□ -1.67
CLDN12P56749 RN7SKP250-201ENST00000363924 321 ntBASIC4.64□□□□□ -1.67
CLDN12P56749 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.64□□□□□ -1.67
CLDN12P56749 PTP4A1P1-201ENST00000420539 515 ntBASIC4.64□□□□□ -1.67
CLDN12P56749 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.64□□□□□ -1.67
CLDN12P56749 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.64□□□□□ -1.67
CLDN12P56749 ARAFP2-201ENST00000440565 559 ntBASIC4.64□□□□□ -1.67
CLDN12P56749 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.64□□□□□ -1.67
CLDN12P56749 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.64□□□□□ -1.67
CLDN12P56749 AC012512.1-201ENST00000446594 718 ntBASIC4.64□□□□□ -1.67
CLDN12P56749 MTND6P5-201ENST00000448266 512 ntBASIC4.64□□□□□ -1.67
CLDN12P56749 AC068228.1-201ENST00000461723 211 ntBASIC4.64□□□□□ -1.67
CLDN12P56749 AC021006.1-201ENST00000489849 553 ntBASIC4.64□□□□□ -1.67
CLDN12P56749 NENFP3-201ENST00000503735 313 ntBASIC4.64□□□□□ -1.67
CLDN12P56749 AC091874.2-201ENST00000505889 720 ntBASIC4.64□□□□□ -1.67
CLDN12P56749 AK6-204ENST00000512561 587 ntTSL 5 BASIC4.64□□□□□ -1.67
CLDN12P56749 RN7SKP5-201ENST00000517045 272 ntBASIC4.64□□□□□ -1.67
CLDN12P56749 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN12P56749 SETP1-201ENST00000556014 845 ntBASIC4.64□□□□□ -1.67
CLDN12P56749 CYCSP38-201ENST00000559840 322 ntBASIC4.64□□□□□ -1.67
CLDN12P56749 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.64□□□□□ -1.67
CLDN12P56749 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.64□□□□□ -1.67
CLDN12P56749 AC015802.2-201ENST00000589690 189 ntBASIC4.64□□□□□ -1.67
CLDN12P56749 AC011500.1-201ENST00000601963 469 ntBASIC4.64□□□□□ -1.67
CLDN12P56749 AC009027.1-201ENST00000604510 479 ntBASIC4.64□□□□□ -1.67
CLDN12P56749 AP001437.1-201ENST00000608783 456 ntBASIC4.64□□□□□ -1.67
CLDN12P56749 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN12P56749 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN12P56749 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN12P56749 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.64□□□□□ -1.67
CLDN12P56749 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms