Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH12P55289 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH12P55289 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH12P55289 OR1E3-201ENST00000575608 948 ntBASIC5.36□□□□□ -1.55
CDH12P55289 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH12P55289 MTCO3P22-201ENST00000603219 784 ntBASIC5.36□□□□□ -1.55
CDH12P55289 AL592494.3-201ENST00000609485 464 ntBASIC5.36□□□□□ -1.55
CDH12P55289 AC004801.6-201ENST00000616571 978 ntBASIC5.36□□□□□ -1.55
CDH12P55289 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH12P55289 AC019080.5-201ENST00000624891 757 ntBASIC5.36□□□□□ -1.55
CDH12P55289 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH12P55289 AC111152.1-202ENST00000635848 339 ntBASIC5.36□□□□□ -1.55
CDH12P55289 AC006927.4-201ENST00000639187 543 ntBASIC5.36□□□□□ -1.55
CDH12P55289 AL645568.2-201ENST00000432815 1337 ntBASIC5.36□□□□□ -1.55
CDH12P55289 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH12P55289 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.36□□□□□ -1.55
CDH12P55289 HSPD1P9-201ENST00000420325 1636 ntBASIC5.36□□□□□ -1.55
CDH12P55289 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH12P55289 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH12P55289 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH12P55289 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CDH12P55289 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH12P55289 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH12P55289 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDH12P55289 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH12P55289 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDH12P55289 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH12P55289 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CDH12P55289 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDH12P55289 AL354854.1-201ENST00000455940 1363 ntBASIC5.35□□□□□ -1.55
CDH12P55289 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH12P55289 RNU1-136P-201ENST00000384181 164 ntBASIC5.35□□□□□ -1.55
CDH12P55289 SNORA51.9-201ENST00000384295 124 ntBASIC5.35□□□□□ -1.55
CDH12P55289 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH12P55289 AL024507.1-201ENST00000412741 274 ntBASIC5.35□□□□□ -1.55
CDH12P55289 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH12P55289 OR13Z1P-201ENST00000416141 834 ntBASIC5.35□□□□□ -1.55
CDH12P55289 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH12P55289 AC009506.2-201ENST00000420635 840 ntBASIC5.35□□□□□ -1.55
CDH12P55289 RPS27AP6-201ENST00000427962 448 ntBASIC5.35□□□□□ -1.55
CDH12P55289 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH12P55289 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH12P55289 PTP4A1P3-201ENST00000433661 420 ntBASIC5.35□□□□□ -1.55
CDH12P55289 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH12P55289 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH12P55289 RNFT1P2-201ENST00000443064 757 ntBASIC5.35□□□□□ -1.55
CDH12P55289 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH12P55289 AC097463.1-201ENST00000447288 481 ntBASIC5.35□□□□□ -1.55
CDH12P55289 AL157777.1-201ENST00000468100 304 ntBASIC5.35□□□□□ -1.55
CDH12P55289 NPM1P29-201ENST00000483112 803 ntBASIC5.35□□□□□ -1.55
CDH12P55289 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.35□□□□□ -1.55
CDH12P55289 TRAV31-201ENST00000502780 342 ntBASIC5.35□□□□□ -1.55
CDH12P55289 RN7SKP35-201ENST00000517210 151 ntBASIC5.35□□□□□ -1.55
CDH12P55289 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH12P55289 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH12P55289 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH12P55289 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH12P55289 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH12P55289 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CDH12P55289 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH12P55289 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.35□□□□□ -1.55
CDH12P55289 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH12P55289 AC002519.2-203ENST00000567043 837 ntBASIC5.35□□□□□ -1.55
CDH12P55289 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.35□□□□□ -1.55
CDH12P55289 MIR744-201ENST00000578242 98 ntBASIC5.35□□□□□ -1.55
CDH12P55289 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH12P55289 AC005726.4-201ENST00000582858 458 ntBASIC5.35□□□□□ -1.55
CDH12P55289 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH12P55289 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH12P55289 AC091057.3-201ENST00000602684 733 ntBASIC5.35□□□□□ -1.55
CDH12P55289 AL583832.1-201ENST00000603227 784 ntBASIC5.35□□□□□ -1.55
CDH12P55289 AC124916.2-201ENST00000604416 224 ntBASIC5.35□□□□□ -1.55
CDH12P55289 RPL12P48-201ENST00000605620 304 ntBASIC5.35□□□□□ -1.55
CDH12P55289 AC145423.1-201ENST00000605712 336 ntBASIC5.35□□□□□ -1.55
CDH12P55289 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH12P55289 AC063944.3-201ENST00000609969 533 ntBASIC5.35□□□□□ -1.55
CDH12P55289 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH12P55289 AC007786.3-201ENST00000615154 596 ntBASIC5.35□□□□□ -1.55
CDH12P55289 AL136228.1-201ENST00000622221 319 ntBASIC5.35□□□□□ -1.55
CDH12P55289 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH12P55289 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH12P55289 AC099654.9-201ENST00000637055 678 ntBASIC5.35□□□□□ -1.55
CDH12P55289 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDH12P55289 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDH12P55289 AC016745.2-201ENST00000608834 3443 ntBASIC5.35□□□□□ -1.55
CDH12P55289 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDH12P55289 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDH12P55289 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH12P55289 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH12P55289 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH12P55289 AC005005.4-201ENST00000623789 16698 ntBASIC5.34□□□□□ -1.55
CDH12P55289 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH12P55289 AC009962.1-201ENST00000567327 3813 ntBASIC5.34□□□□□ -1.55
CDH12P55289 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH12P55289 UGT2B24P-201ENST00000514441 1597 ntBASIC5.34□□□□□ -1.55
CDH12P55289 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CDH12P55289 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH12P55289 TCP1P3-201ENST00000414406 1498 ntBASIC5.34□□□□□ -1.55
CDH12P55289 AC120036.2-201ENST00000509729 1474 ntBASIC5.34□□□□□ -1.55
CDH12P55289 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms