Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AP000894.4-201ENST00000610185 483 ntBASIC5.59□□□□□ -1.51
CDH4P55283 AC073869.8-201ENST00000641806 335 ntBASIC5.59□□□□□ -1.51
CDH4P55283 AC114774.1-201ENST00000507410 1770 ntBASIC5.59□□□□□ -1.51
CDH4P55283 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.59□□□□□ -1.52
CDH4P55283 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.59□□□□□ -1.52
CDH4P55283 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CDH4P55283 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.59□□□□□ -1.52
CDH4P55283 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
CDH4P55283 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH4P55283 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH4P55283 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH4P55283 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH4P55283 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH4P55283 CIR1P2-201ENST00000514821 1342 ntBASIC5.58□□□□□ -1.52
CDH4P55283 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CDH4P55283 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH4P55283 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH4P55283 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CDH4P55283 U3.28-201ENST00000391249 210 ntBASIC5.58□□□□□ -1.52
CDH4P55283 AL390774.1-201ENST00000411924 246 ntBASIC5.58□□□□□ -1.52
CDH4P55283 SMC4P1-201ENST00000414479 527 ntBASIC5.58□□□□□ -1.52
CDH4P55283 AL133325.1-201ENST00000421090 382 ntBASIC5.58□□□□□ -1.52
CDH4P55283 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH4P55283 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH4P55283 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.58□□□□□ -1.52
CDH4P55283 SUMO2P4-201ENST00000504193 276 ntBASIC5.58□□□□□ -1.52
CDH4P55283 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH4P55283 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH4P55283 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.58□□□□□ -1.52
CDH4P55283 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH4P55283 AC027026.1-201ENST00000532323 742 ntBASIC5.58□□□□□ -1.52
CDH4P55283 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH4P55283 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH4P55283 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH4P55283 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH4P55283 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH4P55283 AC005341.1-201ENST00000571086 708 ntBASIC5.58□□□□□ -1.52
CDH4P55283 MIR4489-201ENST00000578869 62 ntBASIC5.58□□□□□ -1.52
CDH4P55283 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH4P55283 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH4P55283 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH4P55283 MIR6826-201ENST00000617808 98 ntBASIC5.58□□□□□ -1.52
CDH4P55283 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH4P55283 uc_338.7-201ENST00000621834 124 ntBASIC5.58□□□□□ -1.52
CDH4P55283 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH4P55283 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH4P55283 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH4P55283 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH4P55283 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CDH4P55283 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH4P55283 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH4P55283 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH4P55283 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH4P55283 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH4P55283 MTCO1P7-201ENST00000419523 1542 ntBASIC5.58□□□□□ -1.52
CDH4P55283 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH4P55283 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH4P55283 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH4P55283 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH4P55283 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CDH4P55283 AL359715.3-201ENST00000569267 2123 ntBASIC5.57□□□□□ -1.52
CDH4P55283 AC140134.1-201ENST00000511830 3544 ntBASIC5.57□□□□□ -1.52
CDH4P55283 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH4P55283 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.57□□□□□ -1.52
CDH4P55283 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH4P55283 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH4P55283 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH4P55283 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CDH4P55283 RNA5SP183-201ENST00000362452 119 ntBASIC5.57□□□□□ -1.52
CDH4P55283 RN7SKP185-201ENST00000362813 326 ntBASIC5.57□□□□□ -1.52
CDH4P55283 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CDH4P55283 AL133388.1-201ENST00000404509 287 ntBASIC5.57□□□□□ -1.52
CDH4P55283 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH4P55283 NPM1P48-201ENST00000436002 853 ntBASIC5.57□□□□□ -1.52
CDH4P55283 GAPDHP25-201ENST00000447061 1001 ntBASIC5.57□□□□□ -1.52
CDH4P55283 RPS26P39-201ENST00000469206 341 ntBASIC5.57□□□□□ -1.52
CDH4P55283 RPL7P39-201ENST00000481157 744 ntBASIC5.57□□□□□ -1.52
CDH4P55283 RPEP1-201ENST00000504507 658 ntBASIC5.57□□□□□ -1.52
CDH4P55283 AC091912.1-201ENST00000511351 248 ntBASIC5.57□□□□□ -1.52
CDH4P55283 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH4P55283 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH4P55283 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH4P55283 HMGB1P40-201ENST00000525121 540 ntBASIC5.57□□□□□ -1.52
CDH4P55283 AC126177.5-201ENST00000549599 178 ntBASIC5.57□□□□□ -1.52
CDH4P55283 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
CDH4P55283 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH4P55283 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.57□□□□□ -1.52
CDH4P55283 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH4P55283 AC136428.4-201ENST00000634254 1155 ntBASIC5.57□□□□□ -1.52
CDH4P55283 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CDH4P55283 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CDH4P55283 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH4P55283 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH4P55283 AL022311.1-201ENST00000623726 19416 ntBASIC5.57□□□□□ -1.52
CDH4P55283 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH4P55283 Z83820.1-201ENST00000456978 1499 ntBASIC5.57□□□□□ -1.52
CDH4P55283 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH4P55283 AC015799.1-201ENST00000622996 3122 ntBASIC5.57□□□□□ -1.52
CDH4P55283 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH4P55283 AC006484.1-201ENST00000435086 1884 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms