Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.16□□□□□ -1.42
COPAP53621 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.16□□□□□ -1.42
COPAP53621 MTND1P8-201ENST00000571424 950 ntBASIC6.16□□□□□ -1.42
COPAP53621 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.16□□□□□ -1.42
COPAP53621 MIR3189-201ENST00000578735 73 ntBASIC6.16□□□□□ -1.42
COPAP53621 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.16□□□□□ -1.42
COPAP53621 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
COPAP53621 BMS1P7-201ENST00000602440 1052 ntBASIC6.16□□□□□ -1.42
COPAP53621 AC005021.1-201ENST00000608730 355 ntBASIC6.16□□□□□ -1.42
COPAP53621 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
COPAP53621 AC127024.6-201ENST00000621598 424 ntBASIC6.16□□□□□ -1.42
COPAP53621 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.16□□□□□ -1.42
COPAP53621 AC006840.1-201ENST00000623069 542 ntBASIC6.16□□□□□ -1.42
COPAP53621 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.16□□□□□ -1.42
COPAP53621 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
COPAP53621 TTC39DP-201ENST00000416781 1688 ntBASIC6.16□□□□□ -1.42
COPAP53621 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.16□□□□□ -1.42
COPAP53621 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.16□□□□□ -1.42
COPAP53621 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
COPAP53621 AC004656.1-201ENST00000568479 4951 ntBASIC6.16□□□□□ -1.42
COPAP53621 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
COPAP53621 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COPAP53621 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.15□□□□□ -1.42
COPAP53621 TCP1P3-201ENST00000414406 1498 ntBASIC6.15□□□□□ -1.42
COPAP53621 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.15□□□□□ -1.42
COPAP53621 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COPAP53621 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
COPAP53621 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
COPAP53621 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.15□□□□□ -1.42
COPAP53621 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COPAP53621 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
COPAP53621 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.15□□□□□ -1.42
COPAP53621 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COPAP53621 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.15□□□□□ -1.42
COPAP53621 RN7SKP292-201ENST00000365522 317 ntBASIC6.15□□□□□ -1.42
COPAP53621 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.15□□□□□ -1.42
COPAP53621 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
COPAP53621 AL121977.1-201ENST00000401636 979 ntBASIC6.15□□□□□ -1.42
COPAP53621 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.15□□□□□ -1.42
COPAP53621 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COPAP53621 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.15□□□□□ -1.42
COPAP53621 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.15□□□□□ -1.42
COPAP53621 RPL12P16-201ENST00000431098 498 ntBASIC6.15□□□□□ -1.42
COPAP53621 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.15□□□□□ -1.42
COPAP53621 TVP23BP2-201ENST00000455082 615 ntBASIC6.15□□□□□ -1.42
COPAP53621 RPSAP39-201ENST00000467439 883 ntBASIC6.15□□□□□ -1.42
COPAP53621 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COPAP53621 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COPAP53621 RNA5SP400-201ENST00000517155 111 ntBASIC6.15□□□□□ -1.42
COPAP53621 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COPAP53621 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.15□□□□□ -1.42
COPAP53621 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.15□□□□□ -1.42
COPAP53621 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.15□□□□□ -1.42
COPAP53621 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.15□□□□□ -1.42
COPAP53621 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.15□□□□□ -1.42
COPAP53621 AL159169.2-201ENST00000610061 1269 ntBASIC6.15□□□□□ -1.42
COPAP53621 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
COPAP53621 AL137067.2-201ENST00000621202 131 ntBASIC6.15□□□□□ -1.42
COPAP53621 AC007683.2-201ENST00000624681 714 ntBASIC6.15□□□□□ -1.42
COPAP53621 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
COPAP53621 CCNT2P1-201ENST00000423082 1315 ntBASIC6.15□□□□□ -1.43
COPAP53621 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COPAP53621 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COPAP53621 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COPAP53621 AP001541.1-201ENST00000623322 1904 ntBASIC6.15□□□□□ -1.43
COPAP53621 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.15□□□□□ -1.43
COPAP53621 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COPAP53621 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
COPAP53621 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
COPAP53621 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
COPAP53621 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COPAP53621 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COPAP53621 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.14□□□□□ -1.43
COPAP53621 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.14□□□□□ -1.43
COPAP53621 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.14□□□□□ -1.43
COPAP53621 TMSB4XP4-201ENST00000323496 618 ntBASIC6.14□□□□□ -1.43
COPAP53621 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COPAP53621 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COPAP53621 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COPAP53621 RNU6-1320P-201ENST00000390838 107 ntBASIC6.14□□□□□ -1.43
COPAP53621 RNU6-1269P-201ENST00000391139 107 ntBASIC6.14□□□□□ -1.43
COPAP53621 AC087752.1-201ENST00000391360 558 ntBASIC6.14□□□□□ -1.43
COPAP53621 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COPAP53621 RPL35AP3-201ENST00000414680 288 ntBASIC6.14□□□□□ -1.43
COPAP53621 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COPAP53621 RPL12P12-201ENST00000424633 501 ntBASIC6.14□□□□□ -1.43
COPAP53621 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.14□□□□□ -1.43
COPAP53621 AL590399.2-201ENST00000427536 309 ntBASIC6.14□□□□□ -1.43
COPAP53621 BX323845.3-201ENST00000428215 527 ntBASIC6.14□□□□□ -1.43
COPAP53621 AL512637.2-201ENST00000431287 1256 ntBASIC6.14□□□□□ -1.43
COPAP53621 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.14□□□□□ -1.43
COPAP53621 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.14□□□□□ -1.43
COPAP53621 AP006222.1-205ENST00000450734 457 ntBASIC6.14□□□□□ -1.43
COPAP53621 RBMY2TP-201ENST00000451162 947 ntBASIC6.14□□□□□ -1.43
COPAP53621 RNU6-599P-201ENST00000459383 107 ntBASIC6.14□□□□□ -1.43
COPAP53621 RNU6-1193P-201ENST00000459461 107 ntBASIC6.14□□□□□ -1.43
COPAP53621 AC107015.1-201ENST00000466902 747 ntBASIC6.14□□□□□ -1.43
COPAP53621 RN7SL269P-201ENST00000467795 305 ntBASIC6.14□□□□□ -1.43
COPAP53621 RN7SL273P-201ENST00000481561 299 ntBASIC6.14□□□□□ -1.43
COPAP53621 NPM1P29-201ENST00000483112 803 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms