Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CPS1P31327 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.55□□□□□ -1.2
CPS1P31327 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CPS1P31327 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CPS1P31327 AC007114.2-201ENST00000576014 4281 ntBASIC7.55□□□□□ -1.2
CPS1P31327 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CPS1P31327 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC7.55□□□□□ -1.2
CPS1P31327 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.55□□□□□ -1.2
CPS1P31327 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CPS1P31327 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CPS1P31327 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
CPS1P31327 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CPS1P31327 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CPS1P31327 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC7.54□□□□□ -1.2
CPS1P31327 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CPS1P31327 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CPS1P31327 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.54□□□□□ -1.2
CPS1P31327 AL132640.2-201ENST00000559968 1698 ntBASIC7.54□□□□□ -1.2
CPS1P31327 MIR23B-201ENST00000384832 97 ntBASIC7.54□□□□□ -1.2
CPS1P31327 RPL10P10-201ENST00000403509 664 ntBASIC7.54□□□□□ -1.2
CPS1P31327 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC7.54□□□□□ -1.2
CPS1P31327 KRT8P51-201ENST00000438938 274 ntBASIC7.54□□□□□ -1.2
CPS1P31327 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC7.54□□□□□ -1.2
CPS1P31327 AC140172.1-201ENST00000502928 141 ntBASIC7.54□□□□□ -1.2
CPS1P31327 OR11H3P-201ENST00000554547 982 ntBASIC7.54□□□□□ -1.2
CPS1P31327 AC021483.2-201ENST00000567415 758 ntBASIC7.54□□□□□ -1.2
CPS1P31327 AP001521.2-201ENST00000608772 546 ntBASIC7.54□□□□□ -1.2
CPS1P31327 DLEU1_1.1-201ENST00000618107 190 ntBASIC7.54□□□□□ -1.2
CPS1P31327 AC135068.5-201ENST00000624197 983 ntBASIC7.54□□□□□ -1.2
CPS1P31327 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC7.54□□□□□ -1.2
CPS1P31327 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.54□□□□□ -1.2
CPS1P31327 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC7.54□□□□□ -1.2
CPS1P31327 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CPS1P31327 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CPS1P31327 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.54□□□□□ -1.2
CPS1P31327 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.2
CPS1P31327 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.53□□□□□ -1.2
CPS1P31327 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CPS1P31327 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CPS1P31327 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC7.53□□□□□ -1.2
CPS1P31327 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CPS1P31327 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CPS1P31327 RNU1-85P-201ENST00000364127 164 ntBASIC7.53□□□□□ -1.2
CPS1P31327 SNORA11C-201ENST00000408532 129 ntBASIC7.53□□□□□ -1.2
CPS1P31327 RNA5SP113-201ENST00000410486 84 ntBASIC7.53□□□□□ -1.2
CPS1P31327 AC096921.1-201ENST00000411661 375 ntBASIC7.53□□□□□ -1.2
CPS1P31327 AC122718.1-201ENST00000439448 744 ntBASIC7.53□□□□□ -1.2
CPS1P31327 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC7.53□□□□□ -1.2
CPS1P31327 FAM133DP-201ENST00000464802 691 ntBASIC7.53□□□□□ -1.2
CPS1P31327 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CPS1P31327 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC7.53□□□□□ -1.2
CPS1P31327 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CPS1P31327 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC7.53□□□□□ -1.2
CPS1P31327 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC7.53□□□□□ -1.2
CPS1P31327 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC7.53□□□□□ -1.2
CPS1P31327 OR52H1-202ENST00000641796 1061 ntBASIC7.53□□□□□ -1.2
CPS1P31327 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC7.53□□□□□ -1.2
CPS1P31327 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CPS1P31327 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CPS1P31327 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CPS1P31327 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.53□□□□□ -1.2
CPS1P31327 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CPS1P31327 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CPS1P31327 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC7.53□□□□□ -1.2
CPS1P31327 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.53□□□□□ -1.2
CPS1P31327 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC7.53□□□□□ -1.2
CPS1P31327 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC7.53□□□□□ -1.2
CPS1P31327 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC7.53□□□□□ -1.2
CPS1P31327 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC7.53□□□□□ -1.2
CPS1P31327 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.53□□□□□ -1.2
CPS1P31327 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CPS1P31327 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
CPS1P31327 RNU1-59P-201ENST00000364829 162 ntBASIC7.52□□□□□ -1.2
CPS1P31327 RPL17P50-201ENST00000396131 546 ntBASIC7.52□□□□□ -1.2
CPS1P31327 AP002530.1-201ENST00000405705 684 ntBASIC7.52□□□□□ -1.2
CPS1P31327 RN7SKP100-201ENST00000411258 284 ntBASIC7.52□□□□□ -1.2
CPS1P31327 AC234779.1-201ENST00000425910 285 ntBASIC7.52□□□□□ -1.2
CPS1P31327 KNOP1P3-201ENST00000446933 426 ntBASIC7.52□□□□□ -1.2
CPS1P31327 snoU13.1-201ENST00000459157 104 ntBASIC7.52□□□□□ -1.2
CPS1P31327 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.52□□□□□ -1.2
CPS1P31327 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC7.52□□□□□ -1.2
CPS1P31327 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC7.52□□□□□ -1.2
CPS1P31327 U1.25-201ENST00000614085 162 ntBASIC7.52□□□□□ -1.2
CPS1P31327 U1.34-201ENST00000618578 162 ntBASIC7.52□□□□□ -1.2
CPS1P31327 U1.31-201ENST00000620022 160 ntBASIC7.52□□□□□ -1.2
CPS1P31327 MTCO1P1-201ENST00000624263 1081 ntBASIC7.52□□□□□ -1.2
CPS1P31327 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC7.52□□□□□ -1.2
CPS1P31327 UGP2-232ENST00000640075 567 ntTSL 5 BASIC7.52□□□□□ -1.2
CPS1P31327 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC7.52□□□□□ -1.2
CPS1P31327 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CPS1P31327 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CPS1P31327 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CPS1P31327 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CPS1P31327 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC7.52□□□□□ -1.21
CPS1P31327 AC006600.2-201ENST00000624834 2506 ntBASIC7.52□□□□□ -1.21
CPS1P31327 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC7.52□□□□□ -1.21
CPS1P31327 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
CPS1P31327 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CPS1P31327 RNA5SP515-201ENST00000364570 118 ntBASIC7.52□□□□□ -1.21
CPS1P31327 NUDT19P3-201ENST00000404698 555 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms