Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC091965.3-201ENST00000506236 208 ntBASIC7.97□□□□□ -1.13
RXRBP28702 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC7.97□□□□□ -1.13
RXRBP28702 NRBF2P4-201ENST00000520874 850 ntBASIC7.97□□□□□ -1.13
RXRBP28702 AC092865.1-201ENST00000544395 1023 ntBASIC7.97□□□□□ -1.13
RXRBP28702 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC7.97□□□□□ -1.13
RXRBP28702 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.97□□□□□ -1.13
RXRBP28702 AC011840.5-201ENST00000582125 771 ntBASIC7.97□□□□□ -1.13
RXRBP28702 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.97□□□□□ -1.13
RXRBP28702 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC7.97□□□□□ -1.13
RXRBP28702 MRPS35P3-201ENST00000603189 709 ntBASIC7.97□□□□□ -1.13
RXRBP28702 AC121247.2-201ENST00000604776 136 ntBASIC7.97□□□□□ -1.13
RXRBP28702 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC7.97□□□□□ -1.13
RXRBP28702 FRG1EP-201ENST00000634469 770 ntBASIC7.97□□□□□ -1.13
RXRBP28702 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC7.97□□□□□ -1.13
RXRBP28702 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RXRBP28702 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.97□□□□□ -1.13
RXRBP28702 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RXRBP28702 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
RXRBP28702 PARP4P2-201ENST00000446672 3326 ntBASIC7.97□□□□□ -1.13
RXRBP28702 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RXRBP28702 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
RXRBP28702 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
RXRBP28702 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.97□□□□□ -1.13
RXRBP28702 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RXRBP28702 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RXRBP28702 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
RXRBP28702 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
RXRBP28702 DDX6P1-205ENST00000441966 1436 ntBASIC7.96□□□□□ -1.13
RXRBP28702 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
RXRBP28702 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.96□□□□□ -1.13
RXRBP28702 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.96□□□□□ -1.13
RXRBP28702 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
RXRBP28702 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.96□□□□□ -1.13
RXRBP28702 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.96□□□□□ -1.14
RXRBP28702 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RXRBP28702 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
RXRBP28702 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RXRBP28702 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC7.96□□□□□ -1.14
RXRBP28702 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
RXRBP28702 HMGB1P13-201ENST00000406019 642 ntBASIC7.96□□□□□ -1.14
RXRBP28702 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.96□□□□□ -1.14
RXRBP28702 RMRPP5-201ENST00000411156 267 ntBASIC7.96□□□□□ -1.14
RXRBP28702 AL356320.2-201ENST00000417263 507 ntBASIC7.96□□□□□ -1.14
RXRBP28702 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.96□□□□□ -1.14
RXRBP28702 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC7.96□□□□□ -1.14
RXRBP28702 AL390023.1-201ENST00000428836 262 ntBASIC7.96□□□□□ -1.14
RXRBP28702 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
RXRBP28702 NMNAT1P2-201ENST00000435192 860 ntBASIC7.96□□□□□ -1.14
RXRBP28702 AC046176.1-201ENST00000435260 1170 ntBASIC7.96□□□□□ -1.14
RXRBP28702 MTCYBP29-201ENST00000436327 1006 ntBASIC7.96□□□□□ -1.14
RXRBP28702 AC016772.1-201ENST00000444170 1261 ntBASIC7.96□□□□□ -1.14
RXRBP28702 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC7.96□□□□□ -1.14
RXRBP28702 RPL32P14-201ENST00000463196 378 ntBASIC7.96□□□□□ -1.14
RXRBP28702 AC117395.1-201ENST00000487390 403 ntBASIC7.96□□□□□ -1.14
RXRBP28702 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RXRBP28702 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.96□□□□□ -1.14
RXRBP28702 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.96□□□□□ -1.14
RXRBP28702 AC117532.1-201ENST00000514638 323 ntBASIC7.96□□□□□ -1.14
RXRBP28702 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC7.96□□□□□ -1.14
RXRBP28702 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC7.96□□□□□ -1.14
RXRBP28702 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC7.96□□□□□ -1.14
RXRBP28702 LRRC6P1-201ENST00000532188 885 ntBASIC7.96□□□□□ -1.14
RXRBP28702 GCSHP4-201ENST00000538792 439 ntBASIC7.96□□□□□ -1.14
RXRBP28702 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RXRBP28702 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC7.96□□□□□ -1.14
RXRBP28702 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC7.96□□□□□ -1.14
RXRBP28702 AGGF1P9-201ENST00000561884 913 ntBASIC7.96□□□□□ -1.14
RXRBP28702 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC7.96□□□□□ -1.14
RXRBP28702 AP000919.1-202ENST00000581139 1264 ntBASIC7.96□□□□□ -1.14
RXRBP28702 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC7.96□□□□□ -1.14
RXRBP28702 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC7.96□□□□□ -1.14
RXRBP28702 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC7.96□□□□□ -1.14
RXRBP28702 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.96□□□□□ -1.14
RXRBP28702 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
RXRBP28702 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
RXRBP28702 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
RXRBP28702 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RXRBP28702 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RXRBP28702 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RXRBP28702 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RXRBP28702 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
RXRBP28702 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.14
RXRBP28702 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
RXRBP28702 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
RXRBP28702 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
RXRBP28702 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RXRBP28702 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RXRBP28702 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RXRBP28702 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.95□□□□□ -1.14
RXRBP28702 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RXRBP28702 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RXRBP28702 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RXRBP28702 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RXRBP28702 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RXRBP28702 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.95□□□□□ -1.14
RXRBP28702 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.95□□□□□ -1.14
RXRBP28702 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.95□□□□□ -1.14
RXRBP28702 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.95□□□□□ -1.14
RXRBP28702 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RXRBP28702 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms