Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 YWHABP2-201ENST00000540201 713 ntBASIC4.6□□□□□ -1.67
CCL1P22362 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.6□□□□□ -1.67
CCL1P22362 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.6□□□□□ -1.67
CCL1P22362 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.6□□□□□ -1.67
CCL1P22362 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.6□□□□□ -1.67
CCL1P22362 AC009597.2-201ENST00000604659 592 ntBASIC4.6□□□□□ -1.67
CCL1P22362 AC011626.1-201ENST00000604710 562 ntBASIC4.6□□□□□ -1.67
CCL1P22362 FAM72A-208ENST00000607379 1139 ntBASIC4.6□□□□□ -1.67
CCL1P22362 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCL1P22362 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.6□□□□□ -1.67
CCL1P22362 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.6□□□□□ -1.67
CCL1P22362 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.6□□□□□ -1.67
CCL1P22362 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCL1P22362 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCL1P22362 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCL1P22362 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.6□□□□□ -1.67
CCL1P22362 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.6□□□□□ -1.67
CCL1P22362 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCL1P22362 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCL1P22362 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.6□□□□□ -1.67
CCL1P22362 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCL1P22362 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCL1P22362 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCL1P22362 AL022311.1-201ENST00000623726 19416 ntBASIC4.6□□□□□ -1.67
CCL1P22362 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCL1P22362 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCL1P22362 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
CCL1P22362 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCL1P22362 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCL1P22362 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCL1P22362 AL353796.1-201ENST00000561542 3241 ntBASIC4.59□□□□□ -1.67
CCL1P22362 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCL1P22362 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCL1P22362 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.59□□□□□ -1.67
CCL1P22362 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCL1P22362 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCL1P22362 MIR133B-201ENST00000362210 119 ntBASIC4.59□□□□□ -1.67
CCL1P22362 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.59□□□□□ -1.67
CCL1P22362 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
CCL1P22362 GABARAPL3-201ENST00000412799 354 ntBASIC4.59□□□□□ -1.67
CCL1P22362 DPPA2P2-201ENST00000418220 897 ntBASIC4.59□□□□□ -1.67
CCL1P22362 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCL1P22362 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.59□□□□□ -1.67
CCL1P22362 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.59□□□□□ -1.67
CCL1P22362 GAPDHP58-201ENST00000438477 1006 ntBASIC4.59□□□□□ -1.67
CCL1P22362 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.59□□□□□ -1.67
CCL1P22362 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.59□□□□□ -1.67
CCL1P22362 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.59□□□□□ -1.67
CCL1P22362 BX842559.2-201ENST00000451418 605 ntBASIC4.59□□□□□ -1.67
CCL1P22362 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCL1P22362 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.59□□□□□ -1.67
CCL1P22362 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.59□□□□□ -1.67
CCL1P22362 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.59□□□□□ -1.67
CCL1P22362 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.59□□□□□ -1.67
CCL1P22362 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.59□□□□□ -1.67
CCL1P22362 AC006349.1-201ENST00000555526 235 ntBASIC4.59□□□□□ -1.67
CCL1P22362 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.59□□□□□ -1.67
CCL1P22362 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCL1P22362 AC015720.2-201ENST00000567709 334 ntBASIC4.59□□□□□ -1.67
CCL1P22362 AC016839.1-201ENST00000578162 867 ntBASIC4.59□□□□□ -1.67
CCL1P22362 MIR1273E-201ENST00000581165 102 ntBASIC4.59□□□□□ -1.67
CCL1P22362 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.59□□□□□ -1.67
CCL1P22362 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.59□□□□□ -1.67
CCL1P22362 AC005252.1-201ENST00000604518 1063 ntBASIC4.59□□□□□ -1.67
CCL1P22362 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CCL1P22362 AC091305.2-201ENST00000624049 1576 ntBASIC4.59□□□□□ -1.67
CCL1P22362 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCL1P22362 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CCL1P22362 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCL1P22362 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCL1P22362 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCL1P22362 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.58□□□□□ -1.68
CCL1P22362 AC104623.2-202ENST00000623477 4002 ntBASIC4.58□□□□□ -1.68
CCL1P22362 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CCL1P22362 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.58□□□□□ -1.68
CCL1P22362 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.58□□□□□ -1.68
CCL1P22362 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCL1P22362 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCL1P22362 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCL1P22362 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CCL1P22362 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CCL1P22362 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCL1P22362 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCL1P22362 RNU1-146P-201ENST00000364015 165 ntBASIC4.58□□□□□ -1.68
CCL1P22362 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.58□□□□□ -1.68
CCL1P22362 RNA5SP284-201ENST00000384547 118 ntBASIC4.58□□□□□ -1.68
CCL1P22362 TRAV35-201ENST00000390462 330 ntBASIC4.58□□□□□ -1.68
CCL1P22362 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CCL1P22362 AC099535.1-201ENST00000408928 371 ntBASIC4.58□□□□□ -1.68
CCL1P22362 SDHDP6-201ENST00000414693 480 ntBASIC4.58□□□□□ -1.68
CCL1P22362 RPS3P2-201ENST00000421346 701 ntBASIC4.58□□□□□ -1.68
CCL1P22362 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.58□□□□□ -1.68
CCL1P22362 AC115283.1-201ENST00000427353 400 ntBASIC4.58□□□□□ -1.68
CCL1P22362 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.58□□□□□ -1.68
CCL1P22362 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCL1P22362 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.58□□□□□ -1.68
CCL1P22362 AC084754.1-201ENST00000463466 464 ntBASIC4.58□□□□□ -1.68
CCL1P22362 PSMA2P2-201ENST00000504319 686 ntBASIC4.58□□□□□ -1.68
CCL1P22362 AC074087.1-201ENST00000512059 724 ntBASIC4.58□□□□□ -1.68
CCL1P22362 AC006427.1-201ENST00000514359 712 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms