Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC242843.1-201ENST00000618702 573 ntBASIC5.68□□□□□ -1.5
PDGFBP01127 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFBP01127 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
PDGFBP01127 MTCO1P7-201ENST00000419523 1542 ntBASIC5.68□□□□□ -1.5
PDGFBP01127 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFBP01127 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
PDGFBP01127 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFBP01127 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PDGFBP01127 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFBP01127 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PDGFBP01127 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFBP01127 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
PDGFBP01127 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
PDGFBP01127 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.67□□□□□ -1.5
PDGFBP01127 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFBP01127 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFBP01127 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFBP01127 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFBP01127 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFBP01127 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.67□□□□□ -1.5
PDGFBP01127 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.67□□□□□ -1.5
PDGFBP01127 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFBP01127 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.67□□□□□ -1.5
PDGFBP01127 OR13K1P-201ENST00000444577 975 ntBASIC5.67□□□□□ -1.5
PDGFBP01127 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.67□□□□□ -1.5
PDGFBP01127 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.67□□□□□ -1.5
PDGFBP01127 AC004129.2-201ENST00000457229 287 ntBASIC5.67□□□□□ -1.5
PDGFBP01127 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.67□□□□□ -1.5
PDGFBP01127 PPP1R11P1-201ENST00000486095 376 ntBASIC5.67□□□□□ -1.5
PDGFBP01127 AL133372.1-201ENST00000493565 745 ntBASIC5.67□□□□□ -1.5
PDGFBP01127 AC015864.1-201ENST00000496512 544 ntBASIC5.67□□□□□ -1.5
PDGFBP01127 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.67□□□□□ -1.5
PDGFBP01127 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
PDGFBP01127 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.67□□□□□ -1.5
PDGFBP01127 AC074255.1-201ENST00000511259 501 ntBASIC5.67□□□□□ -1.5
PDGFBP01127 AP002981.1-201ENST00000517692 975 ntBASIC5.67□□□□□ -1.5
PDGFBP01127 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFBP01127 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PDGFBP01127 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PDGFBP01127 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.67□□□□□ -1.5
PDGFBP01127 PCNPP1-201ENST00000552501 511 ntBASIC5.67□□□□□ -1.5
PDGFBP01127 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.67□□□□□ -1.5
PDGFBP01127 MIR5095-201ENST00000578844 88 ntBASIC5.67□□□□□ -1.5
PDGFBP01127 AC010615.3-201ENST00000597319 394 ntBASIC5.67□□□□□ -1.5
PDGFBP01127 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.67□□□□□ -1.5
PDGFBP01127 AC069307.1-201ENST00000602820 447 ntBASIC5.67□□□□□ -1.5
PDGFBP01127 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFBP01127 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFBP01127 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PDGFBP01127 WBP1LP8-201ENST00000617401 327 ntBASIC5.67□□□□□ -1.5
PDGFBP01127 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.67□□□□□ -1.5
PDGFBP01127 MIR6758-201ENST00000620653 63 ntBASIC5.67□□□□□ -1.5
PDGFBP01127 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
PDGFBP01127 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFBP01127 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFBP01127 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFBP01127 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.67□□□□□ -1.5
PDGFBP01127 AL034546.1-201ENST00000623740 3693 ntBASIC5.67□□□□□ -1.5
PDGFBP01127 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFBP01127 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PDGFBP01127 LINC01963-201ENST00000562038 3148 ntBASIC5.67□□□□□ -1.5
PDGFBP01127 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFBP01127 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.67□□□□□ -1.5
PDGFBP01127 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFBP01127 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFBP01127 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFBP01127 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PDGFBP01127 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFBP01127 THAP12P9-201ENST00000503971 2360 ntBASIC5.66□□□□□ -1.5
PDGFBP01127 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFBP01127 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFBP01127 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.66□□□□□ -1.5
PDGFBP01127 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFBP01127 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFBP01127 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.66□□□□□ -1.5
PDGFBP01127 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFBP01127 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFBP01127 RNU1-149P-201ENST00000390870 161 ntBASIC5.66□□□□□ -1.5
PDGFBP01127 AL133388.1-201ENST00000404509 287 ntBASIC5.66□□□□□ -1.5
PDGFBP01127 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.66□□□□□ -1.5
PDGFBP01127 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.66□□□□□ -1.5
PDGFBP01127 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.66□□□□□ -1.5
PDGFBP01127 USP9YP9-201ENST00000429406 715 ntBASIC5.66□□□□□ -1.5
PDGFBP01127 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.66□□□□□ -1.5
PDGFBP01127 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.66□□□□□ -1.5
PDGFBP01127 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.66□□□□□ -1.5
PDGFBP01127 AC073648.4-201ENST00000442655 781 ntBASIC5.66□□□□□ -1.5
PDGFBP01127 AC105399.1-202ENST00000447303 205 ntBASIC5.66□□□□□ -1.5
PDGFBP01127 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.66□□□□□ -1.5
PDGFBP01127 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.66□□□□□ -1.5
PDGFBP01127 AC239798.3-201ENST00000454459 408 ntBASIC5.66□□□□□ -1.5
PDGFBP01127 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.66□□□□□ -1.5
PDGFBP01127 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.66□□□□□ -1.5
PDGFBP01127 RN7SKP288-201ENST00000516227 268 ntBASIC5.66□□□□□ -1.5
PDGFBP01127 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.66□□□□□ -1.5
PDGFBP01127 AC092490.3-201ENST00000545370 572 ntBASIC5.66□□□□□ -1.5
PDGFBP01127 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.66□□□□□ -1.5
PDGFBP01127 MIR4301-201ENST00000577203 66 ntBASIC5.66□□□□□ -1.5
PDGFBP01127 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.66□□□□□ -1.5
PDGFBP01127 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms