Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 PLAC4-201ENST00000623119 5588 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
USH2AO75445 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
USH2AO75445 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC2.28□□□□□ -2.04
USH2AO75445 ADGRE2-201ENST00000315576 6767 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 MAPK10-270ENST00000641102 3538 ntBASIC2.28□□□□□ -2.04
USH2AO75445 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC2.28□□□□□ -2.04
USH2AO75445 NPM1P51-201ENST00000443470 744 ntBASIC2.28□□□□□ -2.04
USH2AO75445 AC022133.1-201ENST00000490961 571 ntBASIC2.28□□□□□ -2.04
USH2AO75445 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC2.28□□□□□ -2.04
USH2AO75445 AC090424.1-201ENST00000535243 736 ntBASIC2.28□□□□□ -2.04
USH2AO75445 MIR6875-201ENST00000617506 72 ntBASIC2.28□□□□□ -2.04
USH2AO75445 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC2.28□□□□□ -2.04
USH2AO75445 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC2.28□□□□□ -2.04
USH2AO75445 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
USH2AO75445 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC2.28□□□□□ -2.04
USH2AO75445 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC2.28□□□□□ -2.04
USH2AO75445 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC2.28□□□□□ -2.04
USH2AO75445 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
USH2AO75445 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 Z97832.1-201ENST00000402490 328 ntBASIC2.28□□□□□ -2.04
USH2AO75445 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 RN7SKP260-201ENST00000516907 149 ntBASIC2.28□□□□□ -2.04
USH2AO75445 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC2.28□□□□□ -2.04
USH2AO75445 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 AC020910.3-201ENST00000603701 874 ntBASIC2.28□□□□□ -2.04
USH2AO75445 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
USH2AO75445 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.05
USH2AO75445 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.05
USH2AO75445 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC2.28□□□□□ -2.05
USH2AO75445 COL5A2-201ENST00000374866 6949 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
USH2AO75445 AL731566.1-201ENST00000620490 1937 ntBASIC2.28□□□□□ -2.05
USH2AO75445 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC2.28□□□□□ -2.05
USH2AO75445 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
USH2AO75445 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.05
USH2AO75445 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
USH2AO75445 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 NAIP-201ENST00000194097 6088 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 RNU1-74P-201ENST00000384108 171 ntBASIC2.27□□□□□ -2.05
USH2AO75445 MIR105-1-201ENST00000385222 81 ntBASIC2.27□□□□□ -2.05
USH2AO75445 RNA5SP317-201ENST00000410176 116 ntBASIC2.27□□□□□ -2.05
USH2AO75445 RNA5SP311-201ENST00000411290 116 ntBASIC2.27□□□□□ -2.05
USH2AO75445 AC018644.1-201ENST00000429934 551 ntBASIC2.27□□□□□ -2.05
USH2AO75445 RPS29P10-201ENST00000439197 166 ntBASIC2.27□□□□□ -2.05
USH2AO75445 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC2.27□□□□□ -2.05
USH2AO75445 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC2.27□□□□□ -2.05
USH2AO75445 CDV3-208ENST00000511392 554 ntTSL 5 BASIC2.27□□□□□ -2.05
USH2AO75445 RPL23AP94-201ENST00000512518 302 ntBASIC2.27□□□□□ -2.05
USH2AO75445 RNA5SP315-201ENST00000516340 116 ntBASIC2.27□□□□□ -2.05
USH2AO75445 RNA5SP312-201ENST00000517068 116 ntBASIC2.27□□□□□ -2.05
USH2AO75445 IGHV1-14-201ENST00000523391 241 ntBASIC2.27□□□□□ -2.05
USH2AO75445 RGS5-218ENST00000526176 574 ntTSL 4 BASIC2.27□□□□□ -2.05
USH2AO75445 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC2.27□□□□□ -2.05
USH2AO75445 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.27□□□□□ -2.05
USH2AO75445 AC005191.1-201ENST00000603950 358 ntBASIC2.27□□□□□ -2.05
USH2AO75445 AC090948.2-201ENST00000607363 564 ntBASIC2.27□□□□□ -2.05
USH2AO75445 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 TACC2-228ENST00000515273 9245 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
USH2AO75445 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
USH2AO75445 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 AL449283.1-201ENST00000602631 3403 ntBASIC2.27□□□□□ -2.05
USH2AO75445 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC2.27□□□□□ -2.05
USH2AO75445 DRAXIN-201ENST00000294485 7346 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC2.27□□□□□ -2.05
USH2AO75445 AP000547.3-204ENST00000588548 2523 ntBASIC2.27□□□□□ -2.05
USH2AO75445 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH2AO75445 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC2.27□□□□□ -2.05
USH2AO75445 RPL23AP17-201ENST00000401064 499 ntBASIC2.27□□□□□ -2.05
USH2AO75445 RN7SKP114-201ENST00000410327 279 ntBASIC2.27□□□□□ -2.05
USH2AO75445 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.27□□□□□ -2.05
USH2AO75445 AL356276.2-201ENST00000435919 558 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms