Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
NDUFA1O15239 HMGB3P24-201ENST00000433260 622 ntBASIC3.65□□□□□ -1.83
NDUFA1O15239 NDUFS5P5-201ENST00000437256 321 ntBASIC3.65□□□□□ -1.83
NDUFA1O15239 AC006335.2-201ENST00000437993 330 ntBASIC3.65□□□□□ -1.83
NDUFA1O15239 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC3.65□□□□□ -1.83
NDUFA1O15239 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NDUFA1O15239 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC3.65□□□□□ -1.83
NDUFA1O15239 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NDUFA1O15239 AL591473.1-201ENST00000464297 313 ntBASIC3.65□□□□□ -1.83
NDUFA1O15239 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC3.65□□□□□ -1.83
NDUFA1O15239 RPL15P21-201ENST00000495592 567 ntBASIC3.65□□□□□ -1.83
NDUFA1O15239 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NDUFA1O15239 HMGB3P16-201ENST00000508037 287 ntBASIC3.65□□□□□ -1.83
NDUFA1O15239 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC3.65□□□□□ -1.83
NDUFA1O15239 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC3.65□□□□□ -1.83
NDUFA1O15239 OR5H7P-201ENST00000514084 930 ntBASIC3.65□□□□□ -1.83
NDUFA1O15239 AC138938.1-201ENST00000515431 782 ntBASIC3.65□□□□□ -1.83
NDUFA1O15239 RNA5SP438-201ENST00000516561 112 ntBASIC3.65□□□□□ -1.83
NDUFA1O15239 AC011853.1-201ENST00000518911 454 ntBASIC3.65□□□□□ -1.83
NDUFA1O15239 IGLV3-30-201ENST00000524362 298 ntBASIC3.65□□□□□ -1.83
NDUFA1O15239 AC027369.2-201ENST00000528030 440 ntBASIC3.65□□□□□ -1.83
NDUFA1O15239 HMGB1P42-201ENST00000532126 553 ntBASIC3.65□□□□□ -1.83
NDUFA1O15239 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC3.65□□□□□ -1.83
NDUFA1O15239 DCN-210ENST00000547568 823 ntTSL 3 BASIC3.65□□□□□ -1.83
NDUFA1O15239 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC3.65□□□□□ -1.83
NDUFA1O15239 OR11H3P-201ENST00000554547 982 ntBASIC3.65□□□□□ -1.83
NDUFA1O15239 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC3.65□□□□□ -1.83
NDUFA1O15239 AC092121.1-201ENST00000569452 202 ntBASIC3.65□□□□□ -1.83
NDUFA1O15239 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC3.65□□□□□ -1.83
NDUFA1O15239 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC3.65□□□□□ -1.83
NDUFA1O15239 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC3.65□□□□□ -1.83
NDUFA1O15239 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC3.65□□□□□ -1.83
NDUFA1O15239 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NDUFA1O15239 AC063977.5-201ENST00000601044 974 ntBASIC3.65□□□□□ -1.83
NDUFA1O15239 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC3.65□□□□□ -1.83
NDUFA1O15239 AC135068.5-201ENST00000624197 983 ntBASIC3.65□□□□□ -1.83
NDUFA1O15239 AC099654.6-201ENST00000636487 512 ntBASIC3.65□□□□□ -1.83
NDUFA1O15239 AFP-201ENST00000226359 1914 ntTSL 5 BASIC3.65□□□□□ -1.83
NDUFA1O15239 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NDUFA1O15239 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
NDUFA1O15239 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
NDUFA1O15239 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NDUFA1O15239 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
NDUFA1O15239 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NDUFA1O15239 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
NDUFA1O15239 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NDUFA1O15239 AL450345.1-202ENST00000605741 3881 ntBASIC3.65□□□□□ -1.83
NDUFA1O15239 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NDUFA1O15239 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NDUFA1O15239 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
NDUFA1O15239 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NDUFA1O15239 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NDUFA1O15239 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NDUFA1O15239 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NDUFA1O15239 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
NDUFA1O15239 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
NDUFA1O15239 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NDUFA1O15239 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NDUFA1O15239 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC3.64□□□□□ -1.83
NDUFA1O15239 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.64□□□□□ -1.83
NDUFA1O15239 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NDUFA1O15239 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NDUFA1O15239 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NDUFA1O15239 UBBP2-201ENST00000376781 231 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 AC004386.1-201ENST00000393214 761 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 OR7E101P-201ENST00000400428 513 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 MIR1203-201ENST00000408812 85 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 AC113412.1-201ENST00000425840 504 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 AL389925.1-201ENST00000432257 728 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC3.64□□□□□ -1.83
NDUFA1O15239 AL031584.1-201ENST00000447169 754 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC3.64□□□□□ -1.83
NDUFA1O15239 RPSAP37-201ENST00000470913 821 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC3.64□□□□□ -1.83
NDUFA1O15239 CBX1P5-201ENST00000475330 559 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 AC093827.1-201ENST00000480094 861 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC3.64□□□□□ -1.83
NDUFA1O15239 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC3.64□□□□□ -1.83
NDUFA1O15239 OR8G3P-201ENST00000533406 921 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC3.64□□□□□ -1.83
NDUFA1O15239 AC006512.2-201ENST00000543250 486 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NDUFA1O15239 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.64□□□□□ -1.83
NDUFA1O15239 AC079600.1-201ENST00000550326 297 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 HSPE1P2-201ENST00000554777 306 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC3.64□□□□□ -1.83
NDUFA1O15239 AL390726.5-202ENST00000564800 256 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NDUFA1O15239 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC3.64□□□□□ -1.83
NDUFA1O15239 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC3.64□□□□□ -1.83
NDUFA1O15239 AP001496.3-201ENST00000580230 913 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 RN7SL544P-201ENST00000617232 284 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 AP005431.1-201ENST00000618479 319 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 AL591926.1-201ENST00000620542 217 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 RN7SL763P-201ENST00000620922 284 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 AL683826.1-201ENST00000624104 627 ntBASIC3.64□□□□□ -1.83
NDUFA1O15239 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC3.64□□□□□ -1.83
NDUFA1O15239 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC3.64□□□□□ -1.83
NDUFA1O15239 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NDUFA1O15239 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms