Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRFN1Q9P244 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRFN1Q9P244 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRFN1Q9P244 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRFN1Q9P244 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRFN1Q9P244 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRFN1Q9P244 RNA5SP333-201ENST00000363466 118 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 RNA5SP334-201ENST00000364825 118 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC234772.1-201ENST00000377927 937 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 RNU6-225P-201ENST00000384613 103 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 MIR130B-202ENST00000385018 82 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 MIR122-201ENST00000385044 85 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC115285.1-201ENST00000424879 736 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 DEFB130D-201ENST00000426866 237 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC023141.3-201ENST00000436698 278 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 SETP20-201ENST00000457046 852 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC092905.1-201ENST00000467527 949 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 AL355032.1-201ENST00000472981 438 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC012123.2-201ENST00000485809 248 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRFN1Q9P244 AL158068.1-201ENST00000506116 616 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC012146.2-201ENST00000576545 416 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC011492.1-201ENST00000600023 315 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 AL591167.1-201ENST00000607321 456 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC124016.2-201ENST00000610058 665 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRFN1Q9P244 AL096712.1-201ENST00000614561 159 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC024884.1-201ENST00000620583 399 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC126544.2-201ENST00000625174 749 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC132825.7-201ENST00000638744 335 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRFN1Q9P244 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC024651.2-201ENST00000562480 2098 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AL132640.2-201ENST00000559968 1698 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRFN1Q9P244 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRFN1Q9P244 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRFN1Q9P244 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRFN1Q9P244 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRFN1Q9P244 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRFN1Q9P244 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRFN1Q9P244 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRFN1Q9P244 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRFN1Q9P244 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AL445238.1-204ENST00000400311 463 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AL132875.1-201ENST00000403623 949 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 AP000357.1-201ENST00000409926 1165 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC093422.3-201ENST00000428506 305 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 AL353093.1-201ENST00000441292 436 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 TVP23BP2-201ENST00000455082 615 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 RNU7-27P-201ENST00000459281 62 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 RPL7P51-201ENST00000490532 749 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC010374.1-201ENST00000503762 1237 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 CR383658.1-201ENST00000514609 734 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 RN7SKP238-201ENST00000516483 249 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC073581.1-201ENST00000519036 575 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 TRIM77BP-201ENST00000524985 1119 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 AP003396.4-201ENST00000527574 265 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms