Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 CASC19-206ENST00000641028 1430 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 AC073365.1-203ENST00000641055 1992 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 RACGAP1P-201ENST00000550663 1879 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 AC005225.5-201ENST00000623547 2225 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 AC016716.1-201ENST00000265882 708 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 SNORD8-201ENST00000363915 110 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 BTF3P7-201ENST00000407097 488 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 RNA5SP80-201ENST00000410475 111 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 AC245052.5-201ENST00000416320 649 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 AL663061.1-201ENST00000416625 580 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 RNGTTP1-201ENST00000420965 728 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 AC066692.1-201ENST00000421721 457 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 OR6K4P-201ENST00000423179 955 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 MED15P9-201ENST00000424716 533 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 LARP1BP3-201ENST00000437229 869 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 SEPT7P3-201ENST00000455017 621 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 RPS20P23-201ENST00000461683 354 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 CCDC11P1-201ENST00000503137 1162 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 ARL2BPP4-201ENST00000506854 471 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 AC116347.2-201ENST00000514912 523 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 ADI1P2-201ENST00000514945 429 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 RNU6-718P-201ENST00000516166 105 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 IGLVI-70-201ENST00000523272 390 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 USP2-AS1-203ENST00000530002 764 ntTSL 3 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 MRPS21P9-201ENST00000571150 257 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 AC019131.2-201ENST00000609071 870 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 AC138904.2-201ENST00000614412 107 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 AP004289.1-201ENST00000436307 2205 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.74□□□□□ -1.33
SSU72Q9NP77 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SSU72Q9NP77 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
SSU72Q9NP77 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 Z83820.1-201ENST00000456978 1499 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AP002800.1-201ENST00000624982 2225 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC074141.1-201ENST00000588129 2995 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC010624.4-201ENST00000597606 1351 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms