Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 MIR3944-201ENST00000581277 108 ntBASIC5.07□□□□□ -1.6
CHD8Q9HCK8 AC067959.1-201ENST00000604334 379 ntBASIC5.07□□□□□ -1.6
CHD8Q9HCK8 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 MFSD8-239ENST00000641590 2479 ntBASIC5.07□□□□□ -1.6
CHD8Q9HCK8 AC092070.2-203ENST00000598377 3644 ntBASIC5.07□□□□□ -1.6
CHD8Q9HCK8 AL359195.2-201ENST00000623657 4412 ntBASIC5.07□□□□□ -1.6
CHD8Q9HCK8 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 AC130304.1-201ENST00000622942 2385 ntBASIC5.07□□□□□ -1.6
CHD8Q9HCK8 BX284613.1-201ENST00000452221 1641 ntBASIC5.07□□□□□ -1.6
CHD8Q9HCK8 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 RAD23BP1-201ENST00000421404 1227 ntBASIC5.07□□□□□ -1.6
CHD8Q9HCK8 AC096775.1-201ENST00000437724 448 ntBASIC5.07□□□□□ -1.6
CHD8Q9HCK8 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 AC090607.5-201ENST00000615692 224 ntBASIC5.07□□□□□ -1.6
CHD8Q9HCK8 AL355974.3-201ENST00000617383 467 ntBASIC5.07□□□□□ -1.6
CHD8Q9HCK8 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 AL117339.4-201ENST00000608335 7063 ntBASIC5.06□□□□□ -1.6
CHD8Q9HCK8 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 RHOT1P3-201ENST00000436571 331 ntBASIC5.06□□□□□ -1.6
CHD8Q9HCK8 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 RPL34P20-201ENST00000442771 351 ntBASIC5.06□□□□□ -1.6
CHD8Q9HCK8 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 VN1R92P-201ENST00000598511 928 ntBASIC5.06□□□□□ -1.6
CHD8Q9HCK8 AC005377.1-201ENST00000605126 456 ntBASIC5.06□□□□□ -1.6
CHD8Q9HCK8 AL356218.2-201ENST00000605264 187 ntBASIC5.06□□□□□ -1.6
CHD8Q9HCK8 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 RPL7L1P11-201ENST00000446092 721 ntBASIC5.06□□□□□ -1.6
CHD8Q9HCK8 SNORA74D-201ENST00000516404 141 ntBASIC5.06□□□□□ -1.6
CHD8Q9HCK8 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 RN7SL339P-201ENST00000580597 296 ntBASIC5.06□□□□□ -1.6
CHD8Q9HCK8 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.06□□□□□ -1.6
CHD8Q9HCK8 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 RNU6-1279P-201ENST00000383917 103 ntBASIC5.05□□□□□ -1.6
CHD8Q9HCK8 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 CASKP1-201ENST00000412870 582 ntBASIC5.05□□□□□ -1.6
CHD8Q9HCK8 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.05□□□□□ -1.6
CHD8Q9HCK8 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 AC023141.6-201ENST00000429418 337 ntBASIC5.05□□□□□ -1.6
CHD8Q9HCK8 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms