Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 SERPINA10-201ENST00000261994 4978 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 SEC31B-201ENST00000370345 4612 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 HIP1-204ENST00000434438 7066 ntTSL 2 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 SLC22A24-202ENST00000417740 2098 ntAPPRIS ALT1 TSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 LINC00294-201ENST00000631190 3306 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 SELENOWP1-201ENST00000322792 252 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 RNA5SP234-201ENST00000363916 119 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 RNU6-1055P-201ENST00000391085 107 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 CHMP1B2P-201ENST00000399581 597 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AL133396.1-201ENST00000432048 687 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC245047.5-201ENST00000437312 556 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 MTCYBP12-201ENST00000440559 1134 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 snoU13.29-201ENST00000459370 104 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC023424.2-201ENST00000493479 777 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 SUMO2P17-201ENST00000504438 285 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC026726.1-201ENST00000512859 601 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 MED28P5-201ENST00000528254 438 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC083899.3-201ENST00000603413 594 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AL031176.1-201ENST00000604554 466 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 RN7SL715P-201ENST00000606972 286 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC093788.1-201ENST00000609356 927 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC063944.3-201ENST00000609969 533 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 SPATA31D3-201ENST00000445385 4785 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 NLRC5-217ENST00000539144 6505 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 KIF26B-201ENST00000366518 12113 ntTSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 TNXB-201ENST00000375244 13132 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 MIR134-201ENST00000385258 73 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 RPL32P23-201ENST00000397237 405 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 LSM3P3-201ENST00000436601 306 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 MTCYBP39-201ENST00000437562 491 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 RHEBP1-201ENST00000448647 556 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 RPS26P41-201ENST00000450370 284 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms