Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
TM9SF4Q92544 AC114774.1-201ENST00000507410 1770 ntBASIC5.39□□□□□ -1.55
TM9SF4Q92544 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM9SF4Q92544 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM9SF4Q92544 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM9SF4Q92544 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM9SF4Q92544 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM9SF4Q92544 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM9SF4Q92544 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 RNA5SP211-201ENST00000365516 117 ntBASIC5.39□□□□□ -1.55
TM9SF4Q92544 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM9SF4Q92544 BX510359.3-201ENST00000422168 306 ntBASIC5.39□□□□□ -1.55
TM9SF4Q92544 AL356806.1-201ENST00000422524 916 ntBASIC5.39□□□□□ -1.55
TM9SF4Q92544 REREP1Y-201ENST00000422655 198 ntBASIC5.39□□□□□ -1.55
TM9SF4Q92544 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 HMGB3P24-201ENST00000433260 622 ntBASIC5.39□□□□□ -1.55
TM9SF4Q92544 AL627308.1-201ENST00000435693 821 ntBASIC5.39□□□□□ -1.55
TM9SF4Q92544 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 SDR42E1P3-201ENST00000438345 502 ntBASIC5.39□□□□□ -1.55
TM9SF4Q92544 REREP2Y-201ENST00000439103 200 ntBASIC5.39□□□□□ -1.55
TM9SF4Q92544 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 CUBNP2-201ENST00000443534 1139 ntBASIC5.39□□□□□ -1.55
TM9SF4Q92544 EEF1B2P6-201ENST00000445713 673 ntBASIC5.39□□□□□ -1.55
TM9SF4Q92544 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.39□□□□□ -1.55
TM9SF4Q92544 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 RNU6-467P-201ENST00000517027 110 ntBASIC5.39□□□□□ -1.55
TM9SF4Q92544 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 AC126615.2-201ENST00000553003 515 ntBASIC5.39□□□□□ -1.55
TM9SF4Q92544 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM9SF4Q92544 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM9SF4Q92544 AC021766.1-201ENST00000624404 741 ntBASIC5.39□□□□□ -1.55
TM9SF4Q92544 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM9SF4Q92544 ADAM24P-201ENST00000398655 2101 ntBASIC5.39□□□□□ -1.55
TM9SF4Q92544 AP001284.1-201ENST00000528393 2118 ntBASIC5.39□□□□□ -1.55
TM9SF4Q92544 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.39□□□□□ -1.55
TM9SF4Q92544 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF4Q92544 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF4Q92544 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF4Q92544 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.38□□□□□ -1.55
TM9SF4Q92544 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF4Q92544 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF4Q92544 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF4Q92544 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF4Q92544 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF4Q92544 AL391422.1-201ENST00000402155 436 ntBASIC5.38□□□□□ -1.55
TM9SF4Q92544 MRPL53P1-201ENST00000414323 319 ntBASIC5.38□□□□□ -1.55
TM9SF4Q92544 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 BMS1P13-201ENST00000417301 885 ntBASIC5.38□□□□□ -1.55
TM9SF4Q92544 DPPA2P2-201ENST00000418220 897 ntBASIC5.38□□□□□ -1.55
TM9SF4Q92544 AC019205.1-201ENST00000421830 730 ntBASIC5.38□□□□□ -1.55
TM9SF4Q92544 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF4Q92544 AC114878.1-201ENST00000441166 358 ntBASIC5.38□□□□□ -1.55
TM9SF4Q92544 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 AC023141.8-201ENST00000442554 208 ntBASIC5.38□□□□□ -1.55
TM9SF4Q92544 RSU1P1-201ENST00000453416 441 ntBASIC5.38□□□□□ -1.55
TM9SF4Q92544 RNU1-88P-201ENST00000459274 128 ntBASIC5.38□□□□□ -1.55
TM9SF4Q92544 SEPT7P6-201ENST00000469999 1143 ntBASIC5.38□□□□□ -1.55
TM9SF4Q92544 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 NRBF2P4-201ENST00000520874 850 ntBASIC5.38□□□□□ -1.55
TM9SF4Q92544 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 AC002069.2-201ENST00000603580 883 ntBASIC5.38□□□□□ -1.55
TM9SF4Q92544 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 AL035661.1-201ENST00000620459 1144 ntBASIC5.38□□□□□ -1.55
TM9SF4Q92544 CU639417.4-201ENST00000623928 207 ntBASIC5.38□□□□□ -1.55
TM9SF4Q92544 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 AC004808.2-201ENST00000627965 773 ntBASIC5.38□□□□□ -1.55
TM9SF4Q92544 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms