Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC092865.1-201ENST00000544395 1023 ntBASIC5.65□□□□□ -1.5
CPEB3Q8NE35 AC024909.2-201ENST00000553035 286 ntBASIC5.65□□□□□ -1.5
CPEB3Q8NE35 AL049830.4-201ENST00000555149 351 ntBASIC5.65□□□□□ -1.5
CPEB3Q8NE35 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.65□□□□□ -1.5
CPEB3Q8NE35 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.65□□□□□ -1.5
CPEB3Q8NE35 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.65□□□□□ -1.5
CPEB3Q8NE35 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.65□□□□□ -1.5
CPEB3Q8NE35 AL354943.1-201ENST00000572103 781 ntBASIC5.65□□□□□ -1.5
CPEB3Q8NE35 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.65□□□□□ -1.5
CPEB3Q8NE35 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.65□□□□□ -1.5
CPEB3Q8NE35 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.65□□□□□ -1.5
CPEB3Q8NE35 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.65□□□□□ -1.5
CPEB3Q8NE35 SYPL1P2-201ENST00000582878 727 ntBASIC5.65□□□□□ -1.5
CPEB3Q8NE35 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.65□□□□□ -1.5
CPEB3Q8NE35 AC004805.3-201ENST00000603178 310 ntBASIC5.65□□□□□ -1.5
CPEB3Q8NE35 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.65□□□□□ -1.5
CPEB3Q8NE35 AC024589.2-201ENST00000605642 1294 ntBASIC5.65□□□□□ -1.5
CPEB3Q8NE35 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.65□□□□□ -1.5
CPEB3Q8NE35 AC135507.1-201ENST00000607214 561 ntBASIC5.65□□□□□ -1.5
CPEB3Q8NE35 AL021707.7-201ENST00000607991 416 ntBASIC5.65□□□□□ -1.5
CPEB3Q8NE35 AL353600.1-201ENST00000608148 251 ntBASIC5.65□□□□□ -1.5
CPEB3Q8NE35 AL592494.3-201ENST00000609485 464 ntBASIC5.65□□□□□ -1.5
CPEB3Q8NE35 AC068726.1-201ENST00000610993 341 ntBASIC5.65□□□□□ -1.5
CPEB3Q8NE35 AL359513.1-201ENST00000614364 557 ntBASIC5.65□□□□□ -1.5
CPEB3Q8NE35 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.65□□□□□ -1.5
CPEB3Q8NE35 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC5.65□□□□□ -1.5
CPEB3Q8NE35 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.65□□□□□ -1.5
CPEB3Q8NE35 AC006213.6-201ENST00000623722 4179 ntBASIC5.65□□□□□ -1.51
CPEB3Q8NE35 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CPEB3Q8NE35 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.65□□□□□ -1.51
CPEB3Q8NE35 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
CPEB3Q8NE35 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CPEB3Q8NE35 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.65□□□□□ -1.51
CPEB3Q8NE35 AL132640.2-201ENST00000559968 1698 ntBASIC5.65□□□□□ -1.51
CPEB3Q8NE35 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CPEB3Q8NE35 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.65□□□□□ -1.51
CPEB3Q8NE35 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
CPEB3Q8NE35 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
CPEB3Q8NE35 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CPEB3Q8NE35 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
CPEB3Q8NE35 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CPEB3Q8NE35 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CPEB3Q8NE35 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CPEB3Q8NE35 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.65□□□□□ -1.51
CPEB3Q8NE35 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CPEB3Q8NE35 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.65□□□□□ -1.51
CPEB3Q8NE35 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 RNA5SP333-201ENST00000363466 118 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 RNA5SP334-201ENST00000364825 118 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 RNU1-84P-201ENST00000365447 164 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AC245036.1-201ENST00000391727 309 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AL050335.1-201ENST00000396909 869 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 PTP4A1P5-201ENST00000420305 455 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 RPF2P1-201ENST00000424137 906 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AC073476.1-201ENST00000452854 407 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 USP9YP10-201ENST00000454868 628 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AC023245.1-201ENST00000468501 517 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 H3F3AP3-201ENST00000497682 407 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 RPF2P2-201ENST00000504693 896 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AC111000.2-201ENST00000507775 550 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AC026782.2-201ENST00000510845 636 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 USP9YP5-201ENST00000511770 630 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 RN7SKP34-201ENST00000516142 244 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 RNU5A-4P-201ENST00000516588 111 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 MTCYBP20-201ENST00000524239 1129 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 BTG1P1-201ENST00000540396 508 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AL450489.1-201ENST00000612071 468 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 MIR6085-201ENST00000618314 110 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AC241377.1-201ENST00000619797 406 ntBASIC5.64□□□□□ -1.51
CPEB3Q8NE35 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.64□□□□□ -1.51
CPEB3Q8NE35 AC007603.3-201ENST00000636915 979 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms