Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNPOQ8N3V7 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.57□□□□□ -1.36
SYNPOQ8N3V7 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNPOQ8N3V7 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNPOQ8N3V7 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNPOQ8N3V7 AC105114.1-201ENST00000624795 1862 ntBASIC6.57□□□□□ -1.36
SYNPOQ8N3V7 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.57□□□□□ -1.36
SYNPOQ8N3V7 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNPOQ8N3V7 AL137100.1-201ENST00000556703 1620 ntBASIC6.57□□□□□ -1.36
SYNPOQ8N3V7 OFD1P17-201ENST00000437639 3018 ntBASIC6.57□□□□□ -1.36
SYNPOQ8N3V7 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNPOQ8N3V7 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNPOQ8N3V7 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNPOQ8N3V7 AC005261.4-201ENST00000600047 1385 ntBASIC6.57□□□□□ -1.36
SYNPOQ8N3V7 AC093297.3-201ENST00000607056 2517 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 AC100871.1-201ENST00000507871 1456 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 RNU6-549P-201ENST00000384433 107 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 RN7SKP108-201ENST00000411367 328 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 AL445213.1-201ENST00000412589 747 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 IPPKP1-201ENST00000422501 768 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 CDY14P-201ENST00000431260 1014 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 RPS6P15-201ENST00000431996 751 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 CDY12P-201ENST00000440679 1015 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 CDY13P-201ENST00000445813 1015 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 CDY23P-201ENST00000451661 1014 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 RPS27AP2-201ENST00000457576 465 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 AC023194.2-201ENST00000465398 406 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 SNX18P24-201ENST00000505249 671 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 OR4A2P-201ENST00000527276 913 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 NPM1P47-201ENST00000560843 856 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 MIR3614-201ENST00000581261 86 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 CYCSP1-201ENST00000604815 315 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 AL138478.1-201ENST00000612252 832 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 U1.31-201ENST00000620022 160 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 AC078883.4-201ENST00000623218 367 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 OR1S1-201ENST00000624470 978 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 PABPC1P8-201ENST00000452851 2086 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.56□□□□□ -1.36
SYNPOQ8N3V7 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SYNPOQ8N3V7 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SYNPOQ8N3V7 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SYNPOQ8N3V7 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNPOQ8N3V7 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNPOQ8N3V7 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SYNPOQ8N3V7 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.55□□□□□ -1.36
SYNPOQ8N3V7 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.55□□□□□ -1.36
SYNPOQ8N3V7 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNPOQ8N3V7 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNPOQ8N3V7 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNPOQ8N3V7 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNPOQ8N3V7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNPOQ8N3V7 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNPOQ8N3V7 SNORA51.9-201ENST00000384295 124 ntBASIC6.55□□□□□ -1.36
SYNPOQ8N3V7 MIR541-201ENST00000401360 84 ntBASIC6.55□□□□□ -1.36
SYNPOQ8N3V7 FCF1P5-201ENST00000406490 482 ntBASIC6.55□□□□□ -1.36
SYNPOQ8N3V7 MIR1303-201ENST00000408625 86 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms