Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AL731563.1-201ENST00000442202 214 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 AL022238.1-201ENST00000442557 355 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 AL356121.1-201ENST00000442911 156 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 OR51B8P-201ENST00000449892 769 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 PMS2P11-201ENST00000451831 574 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 NDUFA5P7-201ENST00000452914 242 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 AC105918.1-201ENST00000474399 838 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 RPS3AP14-201ENST00000483907 780 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 RNU6-1271P-201ENST00000517049 105 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 IGHV3-32-201ENST00000519182 355 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 MTCO3P22-201ENST00000603219 784 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 AC073137.1-201ENST00000605636 634 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 RMST_7.1-201ENST00000621935 268 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 MIR1321-201ENST00000637766 79 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 ATP8A2P2-201ENST00000437678 1568 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 OR2A3P-202ENST00000641249 1776 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 AL356361.1-201ENST00000400943 1459 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 AC006116.1-201ENST00000587908 2171 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 ARHGAP42P5-201ENST00000548856 2936 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 LINC00622-201ENST00000562811 1570 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 AL118496.1-201ENST00000440201 1812 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 AC131649.2-201ENST00000624925 4439 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 MIR369-201ENST00000362155 70 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 RNU6-560P-201ENST00000364007 108 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 Y_RNA.409-201ENST00000383990 98 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 RNU6-483P-201ENST00000384088 108 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 Y_RNA.476-201ENST00000384347 108 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 RNU6-1222P-201ENST00000384615 107 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 MIR575-201ENST00000385013 94 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 AL354719.1-201ENST00000406535 843 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 RN7SKP148-201ENST00000410179 275 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 Y_RNA.618-201ENST00000410949 107 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 AC007394.1-201ENST00000421941 531 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 AC092170.1-201ENST00000440211 356 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 AL845321.1-201ENST00000444603 348 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 OR52E7P-201ENST00000452394 933 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 RN7SL868P-201ENST00000485915 303 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 RN7SL655P-201ENST00000486087 298 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 RPL39P36-201ENST00000490784 156 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 NIFKP7-201ENST00000503365 834 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 WBP1LP4-201ENST00000505043 344 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 AC108078.1-201ENST00000508073 725 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 HMGB1P44-201ENST00000508597 572 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 RNA5SP518-201ENST00000515957 119 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 RNU6-277P-201ENST00000516272 106 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 AC243972.3-201ENST00000539655 198 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 STX8-209ENST00000574431 731 ntTSL 3 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 MIR4470-201ENST00000583453 72 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 POLR3GP2-201ENST00000588366 668 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 RPSAP66-201ENST00000592196 606 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms