Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RNU1-146P-201ENST00000364015 165 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 ATF1P1-201ENST00000406040 927 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 DHFRP2-201ENST00000414224 547 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 RPS7P14-201ENST00000426405 583 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 AC245047.2-201ENST00000441060 530 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 AC234771.4-201ENST00000441416 730 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 COX4I1P2-201ENST00000447446 547 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 RBMY2TP-201ENST00000451162 947 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 RN7SL643P-201ENST00000471845 291 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 AC022730.1-201ENST00000473114 568 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 RN7SL369P-201ENST00000477138 299 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 RN7SL267P-201ENST00000485107 261 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 AC108103.1-201ENST00000511286 446 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 snoU109.5-201ENST00000516231 132 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 AC020937.1-201ENST00000519677 1013 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 AC025857.2-201ENST00000602711 238 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 AC068726.1-201ENST00000610993 341 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 AL158062.1-201ENST00000619632 745 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 AL137067.2-201ENST00000621202 131 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 MIR6503-201ENST00000622884 86 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 AC120349.3-201ENST00000624377 529 ntBASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTCHD4Q6ZW05 MFSD8-220ENST00000641243 1422 ntBASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 TTC39DP-201ENST00000416781 1688 ntBASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 HMGB1P10-201ENST00000395823 563 ntBASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 ARSFP1-201ENST00000398758 477 ntBASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 AC003045.1-201ENST00000398779 713 ntBASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 SNORA77.2-201ENST00000408571 112 ntBASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 RPL21P50-201ENST00000417698 477 ntBASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 AL645939.3-201ENST00000435408 225 ntBASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 AC093325.1-201ENST00000508378 326 ntBASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 AC005351.1-201ENST00000511152 786 ntBASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 TOMM22P4-201ENST00000511318 336 ntBASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 RNU6-311P-201ENST00000516224 102 ntBASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 AC131935.1-201ENST00000524621 333 ntBASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 AP001804.2-201ENST00000533932 910 ntBASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.57□□□□□ -1.52
PTCHD4Q6ZW05 AC027796.1-201ENST00000575593 512 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms