Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGCS1Q01581 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGCS1Q01581 GOLGA5P1-201ENST00000507317 980 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 ASNSP4-201ENST00000511103 447 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 MTND6P2-201ENST00000512226 524 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGCS1Q01581 CDC42P3-201ENST00000518493 633 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 AC112191.2-201ENST00000522428 333 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGCS1Q01581 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGCS1Q01581 AC010547.6-201ENST00000571789 193 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGCS1Q01581 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGCS1Q01581 AC107993.1-201ENST00000591343 684 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGCS1Q01581 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 AC026367.3-201ENST00000619032 590 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 AL357153.4-201ENST00000620487 1016 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 AC103703.1-201ENST00000634783 663 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 AC099654.6-201ENST00000636487 512 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGCS1Q01581 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS1Q01581 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS1Q01581 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS1Q01581 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGCS1Q01581 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS1Q01581 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
HMGCS1Q01581 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS1Q01581 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS1Q01581 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS1Q01581 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGCS1Q01581 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGCS1Q01581 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS1Q01581 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS1Q01581 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCS1Q01581 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.2□□□□□ -1.58
HMGCS1Q01581 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCS1Q01581 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCS1Q01581 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.2□□□□□ -1.58
HMGCS1Q01581 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HMGCS1Q01581 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.2□□□□□ -1.58
HMGCS1Q01581 AL450345.1-202ENST00000605741 3881 ntBASIC5.2□□□□□ -1.58
HMGCS1Q01581 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HMGCS1Q01581 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCS1Q01581 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.2□□□□□ -1.58
HMGCS1Q01581 RNA5SP46-201ENST00000362370 120 ntBASIC5.2□□□□□ -1.58
HMGCS1Q01581 OR2AT2P-201ENST00000413438 905 ntBASIC5.2□□□□□ -1.58
HMGCS1Q01581 OR6E1P-201ENST00000414424 923 ntBASIC5.2□□□□□ -1.58
HMGCS1Q01581 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.2□□□□□ -1.58
HMGCS1Q01581 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.2□□□□□ -1.58
HMGCS1Q01581 AC017019.1-201ENST00000426129 261 ntBASIC5.2□□□□□ -1.58
HMGCS1Q01581 VTI1BP4-201ENST00000427516 527 ntBASIC5.2□□□□□ -1.58
HMGCS1Q01581 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.2□□□□□ -1.58
HMGCS1Q01581 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.2□□□□□ -1.58
HMGCS1Q01581 RPL5P25-201ENST00000441148 775 ntBASIC5.2□□□□□ -1.58
HMGCS1Q01581 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.2□□□□□ -1.58
HMGCS1Q01581 AC090804.1-201ENST00000448870 490 ntBASIC5.2□□□□□ -1.58
HMGCS1Q01581 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HMGCS1Q01581 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.2□□□□□ -1.58
HMGCS1Q01581 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.2□□□□□ -1.58
HMGCS1Q01581 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCS1Q01581 AL049872.1-201ENST00000556323 322 ntBASIC5.2□□□□□ -1.58
HMGCS1Q01581 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.2□□□□□ -1.58
HMGCS1Q01581 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.2□□□□□ -1.58
HMGCS1Q01581 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCS1Q01581 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.2□□□□□ -1.58
HMGCS1Q01581 AL356608.1-201ENST00000610034 820 ntBASIC5.2□□□□□ -1.58
HMGCS1Q01581 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.2□□□□□ -1.58
HMGCS1Q01581 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.2□□□□□ -1.58
HMGCS1Q01581 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.2□□□□□ -1.58
HMGCS1Q01581 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCS1Q01581 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.2□□□□□ -1.58
HMGCS1Q01581 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCS1Q01581 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCS1Q01581 AC116158.1-201ENST00000560231 2129 ntBASIC5.2□□□□□ -1.58
HMGCS1Q01581 AC005005.4-201ENST00000623789 16698 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS1Q01581 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS1Q01581 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS1Q01581 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS1Q01581 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS1Q01581 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS1Q01581 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS1Q01581 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 ICE2P1-201ENST00000512800 1849 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 SNORA17A-201ENST00000391185 133 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 DBIP1-201ENST00000401435 260 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 AL596448.1-201ENST00000415024 392 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS1Q01581 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms