Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.7□□□□□ -1.5
CLRN1P58418 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.7□□□□□ -1.5
CLRN1P58418 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.7□□□□□ -1.5
CLRN1P58418 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.7□□□□□ -1.5
CLRN1P58418 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.7□□□□□ -1.5
CLRN1P58418 TMEM97P2-201ENST00000517841 403 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 COX6B1P4-201ENST00000519826 484 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLRN1P58418 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.7□□□□□ -1.5
CLRN1P58418 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.7□□□□□ -1.5
CLRN1P58418 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.7□□□□□ -1.5
CLRN1P58418 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.7□□□□□ -1.5
CLRN1P58418 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.7□□□□□ -1.5
CLRN1P58418 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.7□□□□□ -1.5
CLRN1P58418 RBM22P12-201ENST00000567098 1255 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.7□□□□□ -1.5
CLRN1P58418 MIR4732-201ENST00000581873 76 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLRN1P58418 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.7□□□□□ -1.5
CLRN1P58418 VN1R83P-201ENST00000595685 445 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 AC019131.2-201ENST00000609071 870 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 AL159169.2-201ENST00000610061 1269 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 AL589743.6-201ENST00000611025 117 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 AC024255.1-201ENST00000614376 102 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 AL158163.2-201ENST00000619110 700 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.7□□□□□ -1.5
CLRN1P58418 LINC02495-203ENST00000636704 242 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLRN1P58418 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.7□□□□□ -1.5
CLRN1P58418 AC092111.2-201ENST00000611627 1414 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLRN1P58418 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.7□□□□□ -1.5
CLRN1P58418 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CLRN1P58418 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.7□□□□□ -1.5
CLRN1P58418 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.7□□□□□ -1.5
CLRN1P58418 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.7□□□□□ -1.5
CLRN1P58418 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.7□□□□□ -1.5
CLRN1P58418 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLRN1P58418 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLRN1P58418 AL359976.1-201ENST00000418655 3528 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLRN1P58418 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CLRN1P58418 ELL2P3-201ENST00000457883 1602 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.7□□□□□ -1.5
CLRN1P58418 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.7□□□□□ -1.5
CLRN1P58418 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLRN1P58418 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.7□□□□□ -1.5
CLRN1P58418 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.69□□□□□ -1.5
CLRN1P58418 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.69□□□□□ -1.5
CLRN1P58418 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 RN7SKP149-201ENST00000363008 344 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.69□□□□□ -1.5
CLRN1P58418 AL672167.2-201ENST00000377164 879 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 SNORD94-201ENST00000386037 137 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 TAF13P2-201ENST00000416876 286 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.69□□□□□ -1.5
CLRN1P58418 AC007568.1-201ENST00000422912 471 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 AL365203.2-201ENST00000423444 196 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 AC093084.1-201ENST00000424233 687 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 VN1R21P-201ENST00000426703 765 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 COX7BP2-201ENST00000437976 242 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.69□□□□□ -1.5
CLRN1P58418 AC092393.1-201ENST00000439625 742 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 GAPDHP37-201ENST00000442317 968 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.69□□□□□ -1.5
CLRN1P58418 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.69□□□□□ -1.5
CLRN1P58418 AURKAPS1-201ENST00000451805 1212 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.69□□□□□ -1.5
CLRN1P58418 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.69□□□□□ -1.5
CLRN1P58418 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.69□□□□□ -1.5
CLRN1P58418 AC107015.1-201ENST00000466902 747 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 AP003385.3-201ENST00000472498 287 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 AC079080.1-201ENST00000479841 822 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.69□□□□□ -1.5
CLRN1P58418 AC074386.1-206ENST00000487102 761 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 CDH12P2-201ENST00000504393 298 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.69□□□□□ -1.5
CLRN1P58418 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 HIGD1AP18-201ENST00000520730 278 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 PDCL2P2-201ENST00000533651 189 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.69□□□□□ -1.5
CLRN1P58418 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.69□□□□□ -1.5
CLRN1P58418 AC092865.1-201ENST00000544395 1023 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
CLRN1P58418 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.69□□□□□ -1.5
CLRN1P58418 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CLRN1P58418 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms