Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCNKAP51800 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCNKAP51800 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCNKAP51800 AC005261.6-201ENST00000623072 1387 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCNKAP51800 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CLCNKAP51800 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCNKAP51800 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCNKAP51800 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.63□□□□□ -1.51
CLCNKAP51800 MFSD8-239ENST00000641590 2479 ntBASIC5.63□□□□□ -1.51
CLCNKAP51800 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
CLCNKAP51800 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLCNKAP51800 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCNKAP51800 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLCNKAP51800 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCNKAP51800 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CLCNKAP51800 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCNKAP51800 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CLCNKAP51800 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCNKAP51800 MIR323A-201ENST00000362199 86 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCNKAP51800 AL121977.1-201ENST00000401636 979 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 OR2AT2P-201ENST00000413438 905 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 AL596448.1-201ENST00000415024 392 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCNKAP51800 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCNKAP51800 AC009506.2-201ENST00000420635 840 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 AC113412.1-201ENST00000425840 504 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 AL662874.1-201ENST00000426065 230 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCNKAP51800 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.62□□□□□ -1.51
CLCNKAP51800 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLCNKAP51800 RPL12P16-201ENST00000431098 498 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCNKAP51800 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCNKAP51800 AL606490.8-201ENST00000441624 319 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 CYCSP51-201ENST00000443545 318 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCNKAP51800 SEPT7P3-201ENST00000455017 621 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 RN7SL174P-201ENST00000475578 289 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCNKAP51800 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCNKAP51800 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCNKAP51800 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCNKAP51800 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.62□□□□□ -1.51
CLCNKAP51800 AC074087.1-201ENST00000512059 724 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 NRBF2P4-201ENST00000520874 850 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 AC022404.1-201ENST00000555320 273 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 MIR4505-201ENST00000582238 73 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCNKAP51800 FAM60CP-201ENST00000591086 664 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCNKAP51800 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCNKAP51800 MIR6862-1-201ENST00000613016 70 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 MIR6862-2-201ENST00000614755 70 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 AC009032.1-201ENST00000617574 431 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.62□□□□□ -1.51
CLCNKAP51800 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCNKAP51800 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCNKAP51800 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.62□□□□□ -1.51
CLCNKAP51800 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCNKAP51800 CASC19-260ENST00000641828 2001 ntBASIC5.62□□□□□ -1.51
CLCNKAP51800 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCNKAP51800 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCNKAP51800 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCNKAP51800 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCNKAP51800 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLCNKAP51800 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCNKAP51800 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
CLCNKAP51800 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
CLCNKAP51800 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCNKAP51800 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCNKAP51800 RNA5SP131-201ENST00000365452 119 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCNKAP51800 GNG5P2-201ENST00000372054 207 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLCNKAP51800 RNU6-152P-201ENST00000384037 107 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 MIR323B-201ENST00000385269 82 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCNKAP51800 NENFP1-201ENST00000419476 466 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 PTP4A1P1-201ENST00000420539 515 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 AJ239321.1-201ENST00000424255 564 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 AC092651.1-201ENST00000426110 312 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 FAR1P1-201ENST00000427163 934 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 CRIP1P1-201ENST00000427567 185 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 RPL5P2-201ENST00000429598 854 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 MTND5P23-201ENST00000430812 1655 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.61□□□□□ -1.51
CLCNKAP51800 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLCNKAP51800 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.61□□□□□ -1.51
CLCNKAP51800 AL691517.1-201ENST00000440833 1235 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCNKAP51800 PPIAP20-201ENST00000449839 135 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLCNKAP51800 RSU1P1-201ENST00000453416 441 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.61□□□□□ -1.51
CLCNKAP51800 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.61□□□□□ -1.51
CLCNKAP51800 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCNKAP51800 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCNKAP51800 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms