Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRCA2P51587 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC5.61□□□□□ -1.51
BRCA2P51587 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRCA2P51587 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRCA2P51587 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.61□□□□□ -1.51
BRCA2P51587 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRCA2P51587 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.61□□□□□ -1.51
BRCA2P51587 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.61□□□□□ -1.51
BRCA2P51587 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.61□□□□□ -1.51
BRCA2P51587 AC005191.1-201ENST00000603950 358 ntBASIC5.61□□□□□ -1.51
BRCA2P51587 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BRCA2P51587 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.6□□□□□ -1.51
BRCA2P51587 AC010350.1-201ENST00000504908 231 ntBASIC5.6□□□□□ -1.51
BRCA2P51587 AC024220.1-201ENST00000603675 484 ntBASIC5.6□□□□□ -1.51
BRCA2P51587 AC069200.1-201ENST00000609511 323 ntBASIC5.6□□□□□ -1.51
BRCA2P51587 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.6□□□□□ -1.51
BRCA2P51587 CASC19-284ENST00000642142 1868 ntBASIC5.6□□□□□ -1.51
BRCA2P51587 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
BRCA2P51587 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BRCA2P51587 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BRCA2P51587 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BRCA2P51587 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BRCA2P51587 AC068446.1-201ENST00000556425 1549 ntBASIC5.6□□□□□ -1.51
BRCA2P51587 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BRCA2P51587 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
BRCA2P51587 RNA5SP428-201ENST00000365129 132 ntBASIC5.6□□□□□ -1.51
BRCA2P51587 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.6□□□□□ -1.51
BRCA2P51587 ATP5F1P3-201ENST00000397213 657 ntBASIC5.6□□□□□ -1.51
BRCA2P51587 GTF2IP5-201ENST00000414608 731 ntBASIC5.6□□□□□ -1.51
BRCA2P51587 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.6□□□□□ -1.51
BRCA2P51587 AC026726.1-201ENST00000512859 601 ntBASIC5.6□□□□□ -1.51
BRCA2P51587 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.6□□□□□ -1.51
BRCA2P51587 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.6□□□□□ -1.51
BRCA2P51587 AC015799.1-201ENST00000622996 3122 ntBASIC5.6□□□□□ -1.51
BRCA2P51587 FAM71F2-205ENST00000641605 5749 ntBASIC5.6□□□□□ -1.51
BRCA2P51587 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BRCA2P51587 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
BRCA2P51587 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BRCA2P51587 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
BRCA2P51587 CACNB2-209ENST00000396576 4464 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BRCA2P51587 AL627171.1-201ENST00000618845 1308 ntBASIC5.6□□□□□ -1.51
BRCA2P51587 RNU1-74P-201ENST00000384108 171 ntBASIC5.6□□□□□ -1.51
BRCA2P51587 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.6□□□□□ -1.51
BRCA2P51587 AC016831.4-201ENST00000438302 307 ntBASIC5.6□□□□□ -1.51
BRCA2P51587 OR7E125P-201ENST00000443450 846 ntBASIC5.6□□□□□ -1.51
BRCA2P51587 RN7SL542P-201ENST00000467147 294 ntBASIC5.6□□□□□ -1.51
BRCA2P51587 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.6□□□□□ -1.51
BRCA2P51587 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.6□□□□□ -1.51
BRCA2P51587 MIR3158-1-201ENST00000583596 81 ntBASIC5.6□□□□□ -1.51
BRCA2P51587 TBC1D15-217ENST00000550746 6184 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BRCA2P51587 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC5.59□□□□□ -1.51
BRCA2P51587 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.59□□□□□ -1.51
BRCA2P51587 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.59□□□□□ -1.51
BRCA2P51587 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BRCA2P51587 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BRCA2P51587 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BRCA2P51587 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
BRCA2P51587 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BRCA2P51587 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.59□□□□□ -1.51
BRCA2P51587 AC020779.1-201ENST00000478757 796 ntBASIC5.59□□□□□ -1.51
BRCA2P51587 AK3P4-201ENST00000504283 583 ntBASIC5.59□□□□□ -1.51
BRCA2P51587 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.59□□□□□ -1.51
BRCA2P51587 ENPP7P9-201ENST00000514456 627 ntBASIC5.59□□□□□ -1.51
BRCA2P51587 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.59□□□□□ -1.51
BRCA2P51587 OR4A43P-201ENST00000532938 908 ntBASIC5.59□□□□□ -1.51
BRCA2P51587 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.59□□□□□ -1.51
BRCA2P51587 AF131215.7-201ENST00000602443 707 ntBASIC5.59□□□□□ -1.51
BRCA2P51587 AC090948.2-201ENST00000607363 564 ntBASIC5.59□□□□□ -1.51
BRCA2P51587 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BRCA2P51587 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.59□□□□□ -1.51
BRCA2P51587 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BRCA2P51587 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BRCA2P51587 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BRCA2P51587 OR4K17-201ENST00000315543 1032 ntBASIC5.59□□□□□ -1.51
BRCA2P51587 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BRCA2P51587 snoU13.24-201ENST00000458998 104 ntBASIC5.59□□□□□ -1.51
BRCA2P51587 AC005252.1-201ENST00000604518 1063 ntBASIC5.59□□□□□ -1.51
BRCA2P51587 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
BRCA2P51587 AC034229.5-201ENST00000624258 185 ntBASIC5.59□□□□□ -1.51
BRCA2P51587 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.59□□□□□ -1.52
BRCA2P51587 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.59□□□□□ -1.52
BRCA2P51587 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.58□□□□□ -1.52
BRCA2P51587 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
BRCA2P51587 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
BRCA2P51587 PARN-201ENST00000341484 2100 ntTSL 2 BASIC5.58□□□□□ -1.52
BRCA2P51587 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BRCA2P51587 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.58□□□□□ -1.52
BRCA2P51587 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.58□□□□□ -1.52
BRCA2P51587 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.58□□□□□ -1.52
BRCA2P51587 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.58□□□□□ -1.52
BRCA2P51587 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.58□□□□□ -1.52
BRCA2P51587 AP000350.7-201ENST00000624923 8030 ntBASIC5.58□□□□□ -1.52
BRCA2P51587 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
BRCA2P51587 ITGA11-202ENST00000423218 10192 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
BRCA2P51587 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.58□□□□□ -1.52
BRCA2P51587 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.58□□□□□ -1.52
BRCA2P51587 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.58□□□□□ -1.52
BRCA2P51587 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BRCA2P51587 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BRCA2P51587 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms