Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.66□□□□□ -1.5
SLC1A1P43005 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC1A1P43005 SCARNA16.4-201ENST00000516956 187 ntBASIC5.66□□□□□ -1.5
SLC1A1P43005 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC1A1P43005 AC027369.5-201ENST00000533838 755 ntBASIC5.66□□□□□ -1.5
SLC1A1P43005 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC1A1P43005 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.66□□□□□ -1.5
SLC1A1P43005 AC009027.1-201ENST00000604510 479 ntBASIC5.66□□□□□ -1.5
SLC1A1P43005 AL353684.1-201ENST00000622677 1120 ntBASIC5.66□□□□□ -1.5
SLC1A1P43005 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
SLC1A1P43005 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.66□□□□□ -1.5
SLC1A1P43005 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SLC1A1P43005 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SLC1A1P43005 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SLC1A1P43005 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SLC1A1P43005 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SLC1A1P43005 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SLC1A1P43005 MAPK10-328ENST00000641553 4009 ntBASIC5.65□□□□□ -1.5
SLC1A1P43005 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
SLC1A1P43005 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.65□□□□□ -1.5
SLC1A1P43005 OR9G4-201ENST00000302957 984 ntBASIC5.65□□□□□ -1.5
SLC1A1P43005 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SLC1A1P43005 RN7SKP153-201ENST00000365026 316 ntBASIC5.65□□□□□ -1.5
SLC1A1P43005 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.65□□□□□ -1.5
SLC1A1P43005 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SLC1A1P43005 RN7SKP240-201ENST00000410583 375 ntBASIC5.65□□□□□ -1.5
SLC1A1P43005 COX5BP7-201ENST00000414780 274 ntBASIC5.65□□□□□ -1.5
SLC1A1P43005 AL596448.1-201ENST00000415024 392 ntBASIC5.65□□□□□ -1.5
SLC1A1P43005 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.65□□□□□ -1.5
SLC1A1P43005 AC115283.1-201ENST00000427353 400 ntBASIC5.65□□□□□ -1.5
SLC1A1P43005 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.65□□□□□ -1.5
SLC1A1P43005 AC090018.1-201ENST00000434369 367 ntBASIC5.65□□□□□ -1.5
SLC1A1P43005 AC019185.1-201ENST00000442718 389 ntBASIC5.65□□□□□ -1.5
SLC1A1P43005 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.65□□□□□ -1.5
SLC1A1P43005 DNAJB5P1-201ENST00000454004 806 ntBASIC5.65□□□□□ -1.5
SLC1A1P43005 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SLC1A1P43005 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.65□□□□□ -1.5
SLC1A1P43005 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.65□□□□□ -1.5
SLC1A1P43005 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.65□□□□□ -1.5
SLC1A1P43005 GTF2IP11-201ENST00000526931 420 ntBASIC5.65□□□□□ -1.5
SLC1A1P43005 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.65□□□□□ -1.5
SLC1A1P43005 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.65□□□□□ -1.5
SLC1A1P43005 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.65□□□□□ -1.5
SLC1A1P43005 AC040958.1-201ENST00000561102 201 ntBASIC5.65□□□□□ -1.5
SLC1A1P43005 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.65□□□□□ -1.5
SLC1A1P43005 AC134669.1-201ENST00000581275 672 ntBASIC5.65□□□□□ -1.5
SLC1A1P43005 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.65□□□□□ -1.5
SLC1A1P43005 MIR6071-201ENST00000616741 78 ntBASIC5.65□□□□□ -1.5
SLC1A1P43005 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SLC1A1P43005 CU639417.4-201ENST00000623928 207 ntBASIC5.65□□□□□ -1.5
SLC1A1P43005 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.65□□□□□ -1.51
SLC1A1P43005 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
SLC1A1P43005 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.65□□□□□ -1.51
SLC1A1P43005 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SLC1A1P43005 AC022417.1-201ENST00000624768 1303 ntBASIC5.65□□□□□ -1.51
SLC1A1P43005 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.65□□□□□ -1.51
SLC1A1P43005 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.65□□□□□ -1.51
SLC1A1P43005 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.64□□□□□ -1.51
SLC1A1P43005 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC1A1P43005 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC1A1P43005 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SLC1A1P43005 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC1A1P43005 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC1A1P43005 HMGN2P27-201ENST00000427352 270 ntBASIC5.64□□□□□ -1.51
SLC1A1P43005 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC1A1P43005 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC1A1P43005 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC1A1P43005 FMO7P-201ENST00000436045 768 ntBASIC5.64□□□□□ -1.51
SLC1A1P43005 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC1A1P43005 EEF1B2P6-201ENST00000445713 673 ntBASIC5.64□□□□□ -1.51
SLC1A1P43005 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC1A1P43005 CBX1P5-201ENST00000475330 559 ntBASIC5.64□□□□□ -1.51
SLC1A1P43005 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC1A1P43005 RPL15P21-201ENST00000495592 567 ntBASIC5.64□□□□□ -1.51
SLC1A1P43005 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.64□□□□□ -1.51
SLC1A1P43005 AC138866.2-201ENST00000508650 584 ntBASIC5.64□□□□□ -1.51
SLC1A1P43005 RN7SKP70-201ENST00000516655 271 ntBASIC5.64□□□□□ -1.51
SLC1A1P43005 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.64□□□□□ -1.51
SLC1A1P43005 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.64□□□□□ -1.51
SLC1A1P43005 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.64□□□□□ -1.51
SLC1A1P43005 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC1A1P43005 AC005341.1-201ENST00000571086 708 ntBASIC5.64□□□□□ -1.51
SLC1A1P43005 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.64□□□□□ -1.51
SLC1A1P43005 MIR6839-201ENST00000620425 113 ntBASIC5.64□□□□□ -1.51
SLC1A1P43005 AC132068.1-201ENST00000623805 459 ntBASIC5.64□□□□□ -1.51
SLC1A1P43005 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC1A1P43005 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SLC1A1P43005 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC1A1P43005 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC1A1P43005 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC1A1P43005 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC1A1P43005 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC1A1P43005 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC1A1P43005 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC1A1P43005 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC1A1P43005 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC1A1P43005 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.63□□□□□ -1.51
SLC1A1P43005 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC1A1P43005 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC1A1P43005 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms