Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCLP35914 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
HMGCLP35914 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.47□□□□□ -1.53
HMGCLP35914 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGCLP35914 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
HMGCLP35914 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HMGCLP35914 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.46□□□□□ -1.53
HMGCLP35914 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HMGCLP35914 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.53
HMGCLP35914 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HMGCLP35914 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HMGCLP35914 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.46□□□□□ -1.54
HMGCLP35914 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HMGCLP35914 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.46□□□□□ -1.54
HMGCLP35914 RNA5SP234-201ENST00000363916 119 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 RNA5SP242-201ENST00000364171 118 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 SNORD56.6-201ENST00000384569 71 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 AL512422.1-201ENST00000407033 553 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HMGCLP35914 GABARAPL3-201ENST00000412799 354 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 CHEK2P5-201ENST00000423877 246 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 RPL12P18-201ENST00000437175 325 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.46□□□□□ -1.54
HMGCLP35914 NPM1P19-201ENST00000450070 712 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.46□□□□□ -1.54
HMGCLP35914 RN7SL51P-201ENST00000468230 285 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 RPL35AP19-201ENST00000469425 329 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 AL136038.1-201ENST00000497246 351 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 HMGB1P44-201ENST00000508597 572 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 MTND6P2-201ENST00000512226 524 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 RN7SKP99-201ENST00000517028 307 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.46□□□□□ -1.54
HMGCLP35914 AC079064.1-201ENST00000528365 362 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.46□□□□□ -1.54
HMGCLP35914 AC012146.2-201ENST00000576545 416 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.46□□□□□ -1.54
HMGCLP35914 AP005403.1-201ENST00000579720 229 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 AC004477.3-201ENST00000614061 590 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 MIR6133-201ENST00000617057 108 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 AC021766.1-201ENST00000624404 741 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HMGCLP35914 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.46□□□□□ -1.54
HMGCLP35914 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.46□□□□□ -1.54
HMGCLP35914 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HMGCLP35914 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HMGCLP35914 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.46□□□□□ -1.54
HMGCLP35914 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HMGCLP35914 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HMGCLP35914 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
HMGCLP35914 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HMGCLP35914 OR9K1P-202ENST00000641111 3217 ntBASIC5.46□□□□□ -1.54
HMGCLP35914 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HMGCLP35914 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HMGCLP35914 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.45□□□□□ -1.54
HMGCLP35914 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCLP35914 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCLP35914 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCLP35914 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCLP35914 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.45□□□□□ -1.54
HMGCLP35914 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGCLP35914 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCLP35914 MRRFP1-201ENST00000435941 1675 ntBASIC5.45□□□□□ -1.54
HMGCLP35914 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HMGCLP35914 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.45□□□□□ -1.54
HMGCLP35914 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HMGCLP35914 AL133482.1-201ENST00000415988 498 ntBASIC5.45□□□□□ -1.54
HMGCLP35914 NAP1L4P2-201ENST00000425958 899 ntBASIC5.45□□□□□ -1.54
HMGCLP35914 AL121776.1-201ENST00000429337 372 ntBASIC5.45□□□□□ -1.54
HMGCLP35914 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGCLP35914 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.45□□□□□ -1.54
HMGCLP35914 AL359265.1-201ENST00000440296 795 ntBASIC5.45□□□□□ -1.54
HMGCLP35914 AC105399.1-202ENST00000447303 205 ntBASIC5.45□□□□□ -1.54
HMGCLP35914 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGCLP35914 RANP1-206ENST00000455094 651 ntBASIC5.45□□□□□ -1.54
HMGCLP35914 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.45□□□□□ -1.54
HMGCLP35914 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGCLP35914 AC100832.1-201ENST00000471945 383 ntBASIC5.45□□□□□ -1.54
HMGCLP35914 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGCLP35914 RN7SL101P-201ENST00000496350 279 ntBASIC5.45□□□□□ -1.54
HMGCLP35914 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.45□□□□□ -1.54
HMGCLP35914 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGCLP35914 RNU6-1334P-201ENST00000516032 105 ntBASIC5.45□□□□□ -1.54
HMGCLP35914 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.45□□□□□ -1.54
HMGCLP35914 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.45□□□□□ -1.54
HMGCLP35914 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGCLP35914 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGCLP35914 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCLP35914 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGCLP35914 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGCLP35914 AC107993.1-201ENST00000591343 684 ntBASIC5.45□□□□□ -1.54
HMGCLP35914 AC011445.2-201ENST00000599274 173 ntBASIC5.45□□□□□ -1.54
HMGCLP35914 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGCLP35914 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGCLP35914 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCLP35914 MIR8080-201ENST00000622224 89 ntBASIC5.45□□□□□ -1.54
HMGCLP35914 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGCLP35914 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGCLP35914 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
HMGCLP35914 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms