Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNU6-876P-201ENST00000391295 104 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 AC007068.1-201ENST00000396690 844 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 ATP5HP3-201ENST00000396994 486 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 AL773545.3-201ENST00000414297 706 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 FO393419.3-201ENST00000428741 282 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC7.21□□□□□ -1.26
NFKB1P19838 AL354983.1-201ENST00000434580 906 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 LSM3P3-201ENST00000436601 306 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 AL512286.1-201ENST00000439244 400 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC7.21□□□□□ -1.26
NFKB1P19838 HMGB1P16-201ENST00000447155 540 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NFKB1P19838 AL034399.1-201ENST00000451535 380 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 AL390728.3-201ENST00000452704 270 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 RFC5P1-201ENST00000454419 874 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 PNPLA4P1-201ENST00000458328 305 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NFKB1P19838 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC7.21□□□□□ -1.26
NFKB1P19838 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.21□□□□□ -1.26
NFKB1P19838 MRPL49P1-201ENST00000505951 535 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC7.21□□□□□ -1.26
NFKB1P19838 AC097460.2-201ENST00000511857 741 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 AP003084.1-201ENST00000524828 742 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 CENPUP1-201ENST00000526649 1202 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 OR5AK3P-201ENST00000527486 1297 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 AP002453.2-201ENST00000533503 320 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.21□□□□□ -1.26
NFKB1P19838 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC7.21□□□□□ -1.26
NFKB1P19838 GTF2IP22-201ENST00000554443 182 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC7.21□□□□□ -1.26
NFKB1P19838 AC023827.2-201ENST00000566880 1061 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 RBM22P12-201ENST00000567098 1255 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7.21□□□□□ -1.26
NFKB1P19838 MIR4666A-201ENST00000580160 79 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC7.21□□□□□ -1.26
NFKB1P19838 MYLK-221ENST00000583087 678 ntTSL 4 BASIC7.21□□□□□ -1.26
NFKB1P19838 PRR13P5-201ENST00000596581 442 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NFKB1P19838 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC7.21□□□□□ -1.26
NFKB1P19838 AP005137.2-201ENST00000609238 400 ntBASIC7.21□□□□□ -1.26
NFKB1P19838 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.21□□□□□ -1.26
NFKB1P19838 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC7.21□□□□□ -1.26
NFKB1P19838 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
NFKB1P19838 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NFKB1P19838 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.21□□□□□ -1.26
NFKB1P19838 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.21□□□□□ -1.26
NFKB1P19838 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.21□□□□□ -1.26
NFKB1P19838 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NFKB1P19838 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
NFKB1P19838 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NFKB1P19838 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NFKB1P19838 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.21□□□□□ -1.26
NFKB1P19838 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
NFKB1P19838 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NFKB1P19838 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NFKB1P19838 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
NFKB1P19838 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
NFKB1P19838 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
NFKB1P19838 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NFKB1P19838 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NFKB1P19838 AC020978.6-201ENST00000571197 3177 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.2□□□□□ -1.26
NFKB1P19838 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NFKB1P19838 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NFKB1P19838 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
NFKB1P19838 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NFKB1P19838 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NFKB1P19838 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NFKB1P19838 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
NFKB1P19838 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NFKB1P19838 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NFKB1P19838 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NFKB1P19838 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
NFKB1P19838 RNU6-1017P-201ENST00000363613 106 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 Y_RNA.453-201ENST00000384223 109 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 MIR199B-201ENST00000384849 110 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 MT-TL1-201ENST00000386347 75 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 AL356057.2-201ENST00000403318 432 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 HMGB3P18-201ENST00000406327 590 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 RN7SKP285-201ENST00000410137 318 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC7.2□□□□□ -1.26
NFKB1P19838 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC7.2□□□□□ -1.26
NFKB1P19838 UBE2V1P3-201ENST00000439651 417 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 MTND5P14-201ENST00000441481 1267 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 SDHCP3-201ENST00000445371 506 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC7.2□□□□□ -1.26
NFKB1P19838 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC7.2□□□□□ -1.26
NFKB1P19838 AC013267.1-201ENST00000458227 267 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 SNORA35.1-201ENST00000458908 128 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 PSAT1P4-201ENST00000466500 526 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 RPS14P8-201ENST00000478778 369 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 RPS7P6-201ENST00000485777 579 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 MTCYBP18-201ENST00000501056 747 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 AC024589.1-201ENST00000512207 263 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.2□□□□□ -1.26
NFKB1P19838 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC7.2□□□□□ -1.26
NFKB1P19838 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC7.2□□□□□ -1.26
NFKB1P19838 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms