Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SYPL1P2-201ENST00000582878 727 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 AC087575.1-201ENST00000585087 229 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.65□□□□□ -1.18
ERCC3P19447 AC024589.2-201ENST00000605642 1294 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 AL360219.1-201ENST00000610230 366 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 RN7SL261P-201ENST00000613441 282 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
ERCC3P19447 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC7.65□□□□□ -1.18
ERCC3P19447 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.65□□□□□ -1.18
ERCC3P19447 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
ERCC3P19447 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.65□□□□□ -1.19
ERCC3P19447 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
ERCC3P19447 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
ERCC3P19447 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
ERCC3P19447 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
ERCC3P19447 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.65□□□□□ -1.19
ERCC3P19447 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.65□□□□□ -1.19
ERCC3P19447 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.64□□□□□ -1.19
ERCC3P19447 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
ERCC3P19447 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.64□□□□□ -1.19
ERCC3P19447 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
ERCC3P19447 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
ERCC3P19447 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
ERCC3P19447 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
ERCC3P19447 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
ERCC3P19447 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
ERCC3P19447 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.64□□□□□ -1.19
ERCC3P19447 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
ERCC3P19447 AC006042.3-201ENST00000454684 1469 ntBASIC7.64□□□□□ -1.19
ERCC3P19447 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
ERCC3P19447 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.64□□□□□ -1.19
ERCC3P19447 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
ERCC3P19447 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
ERCC3P19447 RNU6-1339P-201ENST00000363574 91 ntBASIC7.64□□□□□ -1.19
ERCC3P19447 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.64□□□□□ -1.19
ERCC3P19447 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
ERCC3P19447 MRPS6P2-201ENST00000381143 370 ntBASIC7.64□□□□□ -1.19
ERCC3P19447 MIR1303-201ENST00000408625 86 ntBASIC7.64□□□□□ -1.19
ERCC3P19447 LSM5-205ENST00000409952 687 ntTSL 4 BASIC7.64□□□□□ -1.19
ERCC3P19447 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC7.64□□□□□ -1.19
ERCC3P19447 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.64□□□□□ -1.19
ERCC3P19447 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC7.64□□□□□ -1.19
ERCC3P19447 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.64□□□□□ -1.19
ERCC3P19447 AC073143.1-201ENST00000436316 395 ntBASIC7.64□□□□□ -1.19
ERCC3P19447 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC7.64□□□□□ -1.19
ERCC3P19447 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
ERCC3P19447 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
ERCC3P19447 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC7.64□□□□□ -1.19
ERCC3P19447 COX4I1P2-201ENST00000447446 547 ntBASIC7.64□□□□□ -1.19
ERCC3P19447 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC7.64□□□□□ -1.19
ERCC3P19447 TRBV8-2-201ENST00000475637 270 ntBASIC7.64□□□□□ -1.19
ERCC3P19447 RPL7P40-201ENST00000481703 745 ntBASIC7.64□□□□□ -1.19
ERCC3P19447 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.64□□□□□ -1.19
ERCC3P19447 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.64□□□□□ -1.19
ERCC3P19447 AC109464.1-201ENST00000511091 819 ntBASIC7.64□□□□□ -1.19
ERCC3P19447 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.64□□□□□ -1.19
ERCC3P19447 C1GALT1P3-201ENST00000522049 819 ntBASIC7.64□□□□□ -1.19
ERCC3P19447 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.64□□□□□ -1.19
ERCC3P19447 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC7.64□□□□□ -1.19
ERCC3P19447 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC7.64□□□□□ -1.19
ERCC3P19447 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.64□□□□□ -1.19
ERCC3P19447 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
ERCC3P19447 AC010198.2-201ENST00000550612 259 ntBASIC7.64□□□□□ -1.19
ERCC3P19447 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.64□□□□□ -1.19
ERCC3P19447 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC7.64□□□□□ -1.19
ERCC3P19447 BNIP3P4-201ENST00000604946 565 ntBASIC7.64□□□□□ -1.19
ERCC3P19447 AC018638.7-201ENST00000605836 1114 ntBASIC7.64□□□□□ -1.19
ERCC3P19447 AC006840.1-201ENST00000623069 542 ntBASIC7.64□□□□□ -1.19
ERCC3P19447 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
ERCC3P19447 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.64□□□□□ -1.19
ERCC3P19447 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
ERCC3P19447 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
ERCC3P19447 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
ERCC3P19447 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
ERCC3P19447 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.64□□□□□ -1.19
ERCC3P19447 AC105749.1-201ENST00000631338 2008 ntBASIC7.64□□□□□ -1.19
ERCC3P19447 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
ERCC3P19447 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
ERCC3P19447 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.64□□□□□ -1.19
ERCC3P19447 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
ERCC3P19447 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC7.63□□□□□ -1.19
ERCC3P19447 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.63□□□□□ -1.19
ERCC3P19447 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
ERCC3P19447 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.63□□□□□ -1.19
ERCC3P19447 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.63□□□□□ -1.19
ERCC3P19447 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 RPL12P13-201ENST00000310055 497 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.63□□□□□ -1.19
ERCC3P19447 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC7.63□□□□□ -1.19
ERCC3P19447 AC006960.1-201ENST00000419980 153 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms