Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.65□□□□□ -1.51
PCNAP12004 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PCNAP12004 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCNAP12004 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCNAP12004 CASC19-238ENST00000641523 1558 ntBASIC5.64□□□□□ -1.51
PCNAP12004 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.64□□□□□ -1.51
PCNAP12004 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCNAP12004 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCNAP12004 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.64□□□□□ -1.51
PCNAP12004 RNFT1P3-201ENST00000340898 1052 ntBASIC5.64□□□□□ -1.51
PCNAP12004 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCNAP12004 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCNAP12004 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PCNAP12004 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.64□□□□□ -1.51
PCNAP12004 CDY17P-201ENST00000414121 1282 ntBASIC5.64□□□□□ -1.51
PCNAP12004 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.64□□□□□ -1.51
PCNAP12004 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.64□□□□□ -1.51
PCNAP12004 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.64□□□□□ -1.51
PCNAP12004 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.64□□□□□ -1.51
PCNAP12004 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.64□□□□□ -1.51
PCNAP12004 CDY8P-201ENST00000428380 1279 ntBASIC5.64□□□□□ -1.51
PCNAP12004 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.64□□□□□ -1.51
PCNAP12004 TUBB4BP6-201ENST00000437576 479 ntBASIC5.64□□□□□ -1.51
PCNAP12004 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.64□□□□□ -1.51
PCNAP12004 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCNAP12004 CDY20P-201ENST00000447528 1279 ntBASIC5.64□□□□□ -1.51
PCNAP12004 RAB28P3-201ENST00000448325 597 ntBASIC5.64□□□□□ -1.51
PCNAP12004 PPIAP27-201ENST00000453800 265 ntBASIC5.64□□□□□ -1.51
PCNAP12004 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PCNAP12004 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCNAP12004 AC108729.2-201ENST00000476543 840 ntBASIC5.64□□□□□ -1.51
PCNAP12004 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.64□□□□□ -1.51
PCNAP12004 RNA5SP340-201ENST00000517132 107 ntBASIC5.64□□□□□ -1.51
PCNAP12004 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.64□□□□□ -1.51
PCNAP12004 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.64□□□□□ -1.51
PCNAP12004 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.64□□□□□ -1.51
PCNAP12004 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.64□□□□□ -1.51
PCNAP12004 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.64□□□□□ -1.51
PCNAP12004 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.64□□□□□ -1.51
PCNAP12004 AC106785.3-201ENST00000564064 847 ntBASIC5.64□□□□□ -1.51
PCNAP12004 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PCNAP12004 MIR4776-2-201ENST00000580204 80 ntBASIC5.64□□□□□ -1.51
PCNAP12004 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.64□□□□□ -1.51
PCNAP12004 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.64□□□□□ -1.51
PCNAP12004 AC090236.2-201ENST00000587933 1101 ntBASIC5.64□□□□□ -1.51
PCNAP12004 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.64□□□□□ -1.51
PCNAP12004 AC010503.3-201ENST00000594355 540 ntBASIC5.64□□□□□ -1.51
PCNAP12004 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.64□□□□□ -1.51
PCNAP12004 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.64□□□□□ -1.51
PCNAP12004 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.64□□□□□ -1.51
PCNAP12004 AC015922.4-201ENST00000612568 690 ntBASIC5.64□□□□□ -1.51
PCNAP12004 AC097372.4-201ENST00000625025 466 ntBASIC5.64□□□□□ -1.51
PCNAP12004 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.64□□□□□ -1.51
PCNAP12004 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.64□□□□□ -1.51
PCNAP12004 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCNAP12004 FBXL21-201ENST00000297158 1305 ntBASIC5.64□□□□□ -1.51
PCNAP12004 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.64□□□□□ -1.51
PCNAP12004 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PCNAP12004 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCNAP12004 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
PCNAP12004 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.64□□□□□ -1.51
PCNAP12004 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCNAP12004 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCNAP12004 AC092111.2-201ENST00000611627 1414 ntBASIC5.64□□□□□ -1.51
PCNAP12004 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.64□□□□□ -1.51
PCNAP12004 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.64□□□□□ -1.51
PCNAP12004 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCNAP12004 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.64□□□□□ -1.51
PCNAP12004 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PCNAP12004 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.64□□□□□ -1.51
PCNAP12004 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCNAP12004 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
PCNAP12004 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCNAP12004 AL360270.2-201ENST00000562952 5985 ntBASIC5.63□□□□□ -1.51
PCNAP12004 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCNAP12004 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCNAP12004 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCNAP12004 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCNAP12004 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.63□□□□□ -1.51
PCNAP12004 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PCNAP12004 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCNAP12004 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PCNAP12004 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PCNAP12004 RNU2-18P-201ENST00000411224 162 ntBASIC5.63□□□□□ -1.51
PCNAP12004 GTF3AP1-201ENST00000416942 1004 ntBASIC5.63□□□□□ -1.51
PCNAP12004 MTND4P24-201ENST00000424002 397 ntBASIC5.63□□□□□ -1.51
PCNAP12004 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.63□□□□□ -1.51
PCNAP12004 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.63□□□□□ -1.51
PCNAP12004 DEFA9P-201ENST00000433042 285 ntBASIC5.63□□□□□ -1.51
PCNAP12004 AC007679.3-201ENST00000434035 414 ntBASIC5.63□□□□□ -1.51
PCNAP12004 MTND2P21-201ENST00000436242 1042 ntBASIC5.63□□□□□ -1.51
PCNAP12004 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.63□□□□□ -1.51
PCNAP12004 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.63□□□□□ -1.51
PCNAP12004 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.63□□□□□ -1.51
PCNAP12004 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.63□□□□□ -1.51
PCNAP12004 RSU1P1-201ENST00000453416 441 ntBASIC5.63□□□□□ -1.51
PCNAP12004 AC006539.1-201ENST00000481419 501 ntBASIC5.63□□□□□ -1.51
PCNAP12004 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.63□□□□□ -1.51
PCNAP12004 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.63□□□□□ -1.51
PCNAP12004 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms