Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFBP01127 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFBP01127 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PDGFBP01127 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.7□□□□□ -1.5
PDGFBP01127 AL133406.3-201ENST00000606817 541 ntBASIC5.7□□□□□ -1.5
PDGFBP01127 AL023583.1-201ENST00000607518 1143 ntBASIC5.7□□□□□ -1.5
PDGFBP01127 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFBP01127 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.7□□□□□ -1.5
PDGFBP01127 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFBP01127 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PDGFBP01127 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.7□□□□□ -1.5
PDGFBP01127 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.7□□□□□ -1.5
PDGFBP01127 AC112243.1-201ENST00000623949 3851 ntBASIC5.7□□□□□ -1.5
PDGFBP01127 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.7□□□□□ -1.5
PDGFBP01127 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFBP01127 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFBP01127 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.69□□□□□ -1.5
PDGFBP01127 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFBP01127 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFBP01127 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.69□□□□□ -1.5
PDGFBP01127 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
PDGFBP01127 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.69□□□□□ -1.5
PDGFBP01127 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.69□□□□□ -1.5
PDGFBP01127 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFBP01127 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFBP01127 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.69□□□□□ -1.5
PDGFBP01127 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFBP01127 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFBP01127 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFBP01127 SNORA16A-201ENST00000384342 137 ntBASIC5.69□□□□□ -1.5
PDGFBP01127 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PDGFBP01127 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.69□□□□□ -1.5
PDGFBP01127 VN1R31P-201ENST00000417498 730 ntBASIC5.69□□□□□ -1.5
PDGFBP01127 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.69□□□□□ -1.5
PDGFBP01127 AC016712.1-201ENST00000431088 378 ntBASIC5.69□□□□□ -1.5
PDGFBP01127 SNRPFP2-201ENST00000440710 251 ntBASIC5.69□□□□□ -1.5
PDGFBP01127 AL022237.1-201ENST00000446663 358 ntBASIC5.69□□□□□ -1.5
PDGFBP01127 RPL31P44-201ENST00000447680 377 ntBASIC5.69□□□□□ -1.5
PDGFBP01127 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.69□□□□□ -1.5
PDGFBP01127 RN7SL385P-201ENST00000468873 276 ntBASIC5.69□□□□□ -1.5
PDGFBP01127 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.69□□□□□ -1.5
PDGFBP01127 HPRT1P1-201ENST00000509498 657 ntBASIC5.69□□□□□ -1.5
PDGFBP01127 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.69□□□□□ -1.5
PDGFBP01127 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.69□□□□□ -1.5
PDGFBP01127 AC005000.1-201ENST00000536192 288 ntBASIC5.69□□□□□ -1.5
PDGFBP01127 AC063949.1-201ENST00000552900 865 ntBASIC5.69□□□□□ -1.5
PDGFBP01127 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.69□□□□□ -1.5
PDGFBP01127 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.69□□□□□ -1.5
PDGFBP01127 AC125494.2-201ENST00000602431 657 ntBASIC5.69□□□□□ -1.5
PDGFBP01127 AC090607.5-201ENST00000615692 224 ntBASIC5.69□□□□□ -1.5
PDGFBP01127 CYP4F35P-202ENST00000636121 390 ntBASIC5.69□□□□□ -1.5
PDGFBP01127 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFBP01127 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFBP01127 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFBP01127 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFBP01127 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
PDGFBP01127 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
PDGFBP01127 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFBP01127 SAMMSON-210ENST00000641260 1308 ntBASIC5.69□□□□□ -1.5
PDGFBP01127 HSPA8P14-201ENST00000552265 1805 ntBASIC5.69□□□□□ -1.5
PDGFBP01127 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFBP01127 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFBP01127 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.69□□□□□ -1.5
PDGFBP01127 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFBP01127 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFBP01127 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PDGFBP01127 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PDGFBP01127 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
PDGFBP01127 AC092692.1-201ENST00000623625 2595 ntBASIC5.68□□□□□ -1.5
PDGFBP01127 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFBP01127 TTC41P-205ENST00000551270 3963 ntBASIC5.68□□□□□ -1.5
PDGFBP01127 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFBP01127 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.68□□□□□ -1.5
PDGFBP01127 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFBP01127 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PDGFBP01127 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFBP01127 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PDGFBP01127 RNU1-32P-201ENST00000363937 159 ntBASIC5.68□□□□□ -1.5
PDGFBP01127 MIR192-201ENST00000384915 110 ntBASIC5.68□□□□□ -1.5
PDGFBP01127 AL445213.1-201ENST00000412589 747 ntBASIC5.68□□□□□ -1.5
PDGFBP01127 AC096644.3-201ENST00000416788 338 ntBASIC5.68□□□□□ -1.5
PDGFBP01127 DPPA2P2-201ENST00000418220 897 ntBASIC5.68□□□□□ -1.5
PDGFBP01127 PTP4A1P1-201ENST00000420539 515 ntBASIC5.68□□□□□ -1.5
PDGFBP01127 DSTNP5-201ENST00000427921 523 ntBASIC5.68□□□□□ -1.5
PDGFBP01127 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFBP01127 AC015983.1-201ENST00000441577 373 ntBASIC5.68□□□□□ -1.5
PDGFBP01127 AC011753.3-201ENST00000443436 406 ntBASIC5.68□□□□□ -1.5
PDGFBP01127 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFBP01127 AL603882.1-201ENST00000463059 681 ntBASIC5.68□□□□□ -1.5
PDGFBP01127 AC128716.1-201ENST00000475129 166 ntBASIC5.68□□□□□ -1.5
PDGFBP01127 AC068522.1-201ENST00000482895 345 ntBASIC5.68□□□□□ -1.5
PDGFBP01127 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.68□□□□□ -1.5
PDGFBP01127 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.68□□□□□ -1.5
PDGFBP01127 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.68□□□□□ -1.5
PDGFBP01127 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFBP01127 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.68□□□□□ -1.5
PDGFBP01127 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.68□□□□□ -1.5
PDGFBP01127 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFBP01127 AC245389.2-201ENST00000616023 576 ntBASIC5.68□□□□□ -1.5
PDGFBP01127 AC109583.2-201ENST00000617367 129 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms