Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 RFPL4AP6-201ENST00000616792 846 ntBASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 AC015914.2-201ENST00000618167 288 ntBASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 LYARP1-201ENST00000436977 1501 ntBASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 AC097461.1-201ENST00000568928 2821 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 PWAR1-201ENST00000624188 2414 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 RNU1-19P-201ENST00000363306 165 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 RNU1-146P-201ENST00000364015 165 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 RNA5SP85-201ENST00000365378 119 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 PSMA6P1-201ENST00000400275 741 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 SNORA79B-201ENST00000410557 148 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 AC244033.1-201ENST00000426826 870 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 OR6R1P-201ENST00000431838 940 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 AL450023.1-201ENST00000450868 751 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 AL358876.1-201ENST00000453364 1075 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 AC098583.1-201ENST00000480875 255 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 RPL29P23-201ENST00000486188 442 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 RPL9P15-201ENST00000491096 532 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 AC092349.1-201ENST00000504903 310 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 GAPDHP71-201ENST00000511530 1003 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 TDGP1-201ENST00000543961 1229 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 AC096996.1-201ENST00000563813 325 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 AC025283.1-201ENST00000572039 734 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 MIR3157-201ENST00000578688 85 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 AL589765.6-201ENST00000601909 549 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 AC012368.3-201ENST00000604190 219 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 AC090607.5-201ENST00000615692 224 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 AC074140.1-201ENST00000621617 208 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.3□□□□□ -1.72
RBFOX3A6NFN3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 AC079298.1-201ENST00000625026 1619 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 SOCS5P3-201ENST00000425115 1576 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 RNU1-134P-201ENST00000362935 165 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 RN7SKP125-201ENST00000410481 302 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 RPSAP35-201ENST00000413753 818 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 CDY17P-201ENST00000414121 1282 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 KIF4CP-201ENST00000422742 1279 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 CDY8P-201ENST00000428380 1279 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 AL354893.1-201ENST00000433735 348 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 GAPDHP48-201ENST00000436626 961 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 TUBB4BP6-201ENST00000437576 479 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 CDY20P-201ENST00000447528 1279 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 AL445466.1-201ENST00000448432 357 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 CR383658.1-201ENST00000514609 734 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms